RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 AFAP1L1Q8TED9 768 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 ALS2CR12Q96Q35 445 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 FBXO3Q9UK99 471 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 GOLGA6L10A6NI86 522 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 TNNI2P48788 182 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 TOB1P50616 345 aaPredicted RBP13.48□□□□□ -0.25
NCDN-202ENST00000373243 CDR1P51861 262 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 ACTN3Q08043 901 aaPredicted RBP13.48□□□□□ -0.25
NCDN-202ENST00000373243 TRIM65Q6PJ69 517 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 NAA15Q9BXJ9 866 aaKnown RBP13.48□□□□□ -0.25
NCDN-202ENST00000373243 FAM169AQ9Y6X4 670 aa13.48□□□□□ -0.25
NCDN-202ENST00000373243 RPSAP08865 295 aaKnown RBP13.47□□□□□ -0.25
NCDN-202ENST00000373243 PARP1P09874 1014 aaKnown RBP13.47□□□□□ -0.25
NCDN-202ENST00000373243 CYP2D6P10635 497 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 SCG2P13521 617 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 MAP3K9P80192 1104 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 CASP8Q14790 479 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.47□□□□□ -0.25
NCDN-202ENST00000373243 RNF26Q9BY78 433 aaPredicted RBP13.47□□□□□ -0.25
NCDN-202ENST00000373243 WDR17Q8IZU2 1322 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 KDM6AO15550 1401 aaPredicted RBP13.47□□□□□ -0.25
NCDN-202ENST00000373243 BMP6P22004 513 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 MCM3P25205 808 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 SLC39A2Q9NP94 309 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 SAMM50Q9Y512 469 aa13.47□□□□□ -0.25
NCDN-202ENST00000373243 GBP2P32456 591 aaPredicted RBP13.46□□□□□ -0.25
NCDN-202ENST00000373243 VSNL1P62760 191 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 PICALMQ13492 652 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 ENAHQ8N8S7 591 aaPredicted RBP13.46□□□□□ -0.25
NCDN-202ENST00000373243 EHBP1Q8NDI1 1231 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 NKX2-3Q8TAU0 364 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 TECP42680 631 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 PRPF4BQ13523 1007 aaKnown RBP13.46□□□□□ -0.25
NCDN-202ENST00000373243 CABS1Q96KC9 395 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 SCLT1Q96NL6 688 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 PYM1Q9BRP8 204 aaKnown RBP13.46□□□□□ -0.25
NCDN-202ENST00000373243 POLD4Q9HCU8 107 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.46□□□□□ -0.25
NCDN-202ENST00000373243 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.46□□□□□ -0.25
NCDN-202ENST00000373243 SPATA31A3Q5VYP0 1347 aa13.46□□□□□ -0.25
NCDN-202ENST00000373243 BUB1O43683 1085 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 CD44P16070 742 aaKnown RBP13.46□□□□□ -0.26
NCDN-202ENST00000373243 AMPD3Q01432 767 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 PSMD2Q13200 908 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 SGMS1Q86VZ5 419 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 MAP3K14Q99558 947 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 LUC7LQ9NQ29 371 aaKnown RBP13.46□□□□□ -0.26
NCDN-202ENST00000373243 HPSEQ9Y251 543 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 CPDO75976 1380 aa13.46□□□□□ -0.26
NCDN-202ENST00000373243 MYO1FO00160 1098 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 RRAGAQ7L523 313 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 MAPKAPK5Q8IW41 473 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 BLIDQ8IZY5 108 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 FAM76AQ8TAV0 307 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 RIN2Q8WYP3 895 aaPredicted RBP13.45□□□□□ -0.26
NCDN-202ENST00000373243 NLRP3Q96P20 1036 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 A0A1B0GUA9 196 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 GOLGA6CA6NDK9 693 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 GTPBP6O43824 516 aaPredicted RBP13.45□□□□□ -0.26
NCDN-202ENST00000373243 NDUFA10O95299 355 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 GOLGA6DP0CG33 693 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 TMEM266Q2M3C6 531 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 CCDC93Q567U6 631 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 FAM114A1Q8IWE2 563 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 ZSCAN29Q8IWY8 852 aaPredicted RBP13.45□□□□□ -0.26
NCDN-202ENST00000373243 OTUD6BQ8N6M0 293 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 PANX2Q96RD6 677 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 TSG101Q99816 390 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 SPATS2LQ9NUQ6 558 aaKnown RBP13.45□□□□□ -0.26
NCDN-202ENST00000373243 GOLGA6AQ9NYA3 693 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 SETD1AO15047 1707 aaKnown RBP13.45□□□□□ -0.26
NCDN-202ENST00000373243 SLC7A5Q01650 507 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 E2F5Q15329 346 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 DDB1Q16531 1140 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 WHAMMP3Q1A5X7 153 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 TEX11Q8IYF3 940 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 NOA1Q8NC60 698 aaKnown RBP13.45□□□□□ -0.26
NCDN-202ENST00000373243 PNMA1Q8ND90 353 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 DYNLL2Q96FJ2 89 aa13.45□□□□□ -0.26
NCDN-202ENST00000373243 GOLGA6BA6NDN3 693 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 TRAF5O00463 557 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 HSF2BPO75031 334 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 HIBADHP31937 336 aaKnown RBP13.44□□□□□ -0.26
NCDN-202ENST00000373243 PRCPP42785 496 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 MAGEA1P43355 309 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 ATP1A2P50993 1020 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 C2orf54Q08AI8 447 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 KCTD16Q68DU8 428 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 CABP7Q86V35 215 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 TUBGCP2Q9BSJ2 902 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 INTS13Q9NVM9 706 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 TTC26A0AVF1 554 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 NR1I3Q14994 352 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 NTRK3Q16288 839 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 NELFCDQ8IXH7 590 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 IFIH1Q9BYX4 1025 aaKnown RBP13.44□□□□□ -0.26
NCDN-202ENST00000373243 NUCKS1Q9H1E3 243 aaKnown RBP13.44□□□□□ -0.26
NCDN-202ENST00000373243 ABHD10Q9NUJ1 306 aa13.44□□□□□ -0.26
NCDN-202ENST00000373243 BIN2Q9UBW5 565 aaPredicted RBP13.44□□□□□ -0.26
NCDN-202ENST00000373243 MEGF6O75095 1541 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 115.1 ms