RNA–Protein interactions for RNA: ENST00000372922.8

TRERF1-204, Transcript of transcriptional regulating factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRERF1, Length 7,286 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-204ENST00000372922 PNMA1Q8ND90 353 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 U2AF1L4Q8WU68 220 aaKnown RBP10.86□□□□□ -0.67
TRERF1-204ENST00000372922 IFIH1Q9BYX4 1025 aaKnown RBP10.86□□□□□ -0.67
TRERF1-204ENST00000372922 GOLGA8CPA6NN73 597 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 PPARDQ03181 441 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 ITKQ08881 620 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 LRRC47Q8N1G4 583 aaKnown RBP10.86□□□□□ -0.67
TRERF1-204ENST00000372922 SLC17A8Q8NDX2 589 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 VPS37BQ9H9H4 285 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 SUGCTQ9HAC7 445 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 CBX8Q9HC52 389 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 OGFRQ9NZT2 677 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 KLRF2D3W0D1 207 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 PCCAP05165 728 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-204ENST00000372922 TMEM191BP0C7N4 346 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 PDE6CP51160 858 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 MAP3K7CLP57077 242 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 LRRC23Q53EV4 343 aaPredicted RBP10.86□□□□□ -0.67
TRERF1-204ENST00000372922 BSPRYQ5W0U4 402 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 FAM178BQ8IXR5 827 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 CCDC51Q96ER9 411 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 CSRNP1Q96S65 589 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 TM6SF1Q9BZW5 370 aa10.86□□□□□ -0.67
TRERF1-204ENST00000372922 TLR3O15455 904 aaKnown RBP10.85□□□□□ -0.67
TRERF1-204ENST00000372922 KCTD2Q14681 263 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 KRT12Q99456 494 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 SPATS2LQ9NUQ6 558 aaKnown RBP10.85□□□□□ -0.67
TRERF1-204ENST00000372922 ZMYM6O95789 1325 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 ERBB4Q15303 1308 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 OR52Z1P0C646 297 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 COG7P83436 770 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 TMED1Q13445 227 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 RPS6KA2Q15349 733 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 SLFN13Q68D06 897 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 TMC4Q7Z404 712 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 AP5M1Q9H0R1 490 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 RIC8AQ9NPQ8 531 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 FAM207AQ9NSI2 230 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-204ENST00000372922 TRIM35Q9UPQ4 493 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 COL4A3BPQ9Y5P4 624 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 FOSP01100 380 aaPredicted RBP10.85□□□□□ -0.67
TRERF1-204ENST00000372922 ABI1Q8IZP0 508 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 SERTAD1Q9UHV2 236 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 RNF8O76064 485 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 BCAMP50895 628 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 USP14P54578 494 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 CHRNDQ07001 517 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 SORBS3O60504 671 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 PPP2R5EQ16537 467 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 QTRT2Q9H974 415 aaKnown RBP10.85□□□□□ -0.67
TRERF1-204ENST00000372922 BCAP29Q9UHQ4 241 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 IPO11Q9UI26 975 aaKnown RBP10.85□□□□□ -0.67
TRERF1-204ENST00000372922 LEMD3Q9Y2U8 911 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 MED23Q9ULK4 1368 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 CFAP43Q8NDM7 1665 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 ZNF804BA4D1E1 1349 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 XDHP47989 1333 aa10.85□□□□□ -0.67
TRERF1-204ENST00000372922 CSPG5O95196 566 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 U2AF2P26368 475 aaKnown RBP eCLIP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 SUPT20HL1Q3ZLR7 823 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 ZNF772Q68DY9 489 aaPredicted RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 JPH2Q9BR39 696 aaPredicted RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 LARSQ9P2J5 1176 aaKnown RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 MAP3K15Q6ZN16 1313 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 CDC37L1Q7L3B6 337 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 SESTD1Q86VW0 696 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 NOSTRINQ8IVI9 506 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 PPP4R1Q8TF05 950 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 CCDC17Q96LX7 622 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 NLRC4Q9NPP4 1024 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 ARMCX3Q9UH62 379 aaPredicted RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 WDR17Q8IZU2 1322 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 TYW5A2RUC4 315 aaKnown RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 SEMA3EO15041 775 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 AOC3Q16853 763 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 FANCBQ8NB91 859 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 ARHGEF2Q92974 986 aaKnown RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 METTL14Q9HCE5 456 aaKnown RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 ZMYM4Q5VZL5 1548 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 PLEKHG3A1L390 1219 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 TMEM232C9JQI7 657 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 ATXN8OSP0DMR3 200 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 SCG2P13521 617 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 PDE6AP16499 860 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 PTPREP23469 700 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 MTX1Q13505 466 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 POLA2Q14181 598 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 ARMCX5Q6P1M9 558 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 EXOC8Q8IYI6 725 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 DACT3Q96B18 629 aaPredicted RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 TACO1Q9BSH4 297 aaKnown RBP10.84□□□□□ -0.67
TRERF1-204ENST00000372922 CFAP74Q9C0B2 1584 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 LRRIQ4A6NIV6 560 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 TXNDC9O14530 226 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 PSMD6Q15008 389 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 VSIG1Q86XK7 387 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 SDR42E1Q8WUS8 393 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 SLF1Q9BQI6 1058 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 KCNJ18B7U540 433 aa10.84□□□□□ -0.67
TRERF1-204ENST00000372922 IFRD2Q12894 506 aaPredicted RBP10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms