RNA–Protein interactions for RNA: ENST00000372917.8

TRERF1-203, Transcript of transcriptional regulating factor 1, humanhuman

TSL 1 (best) BASIC

Gene TRERF1, Length 3,914 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-203ENST00000372917 ENGASEQ8NFI3 743 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 DMAP1Q9NPF5 467 aaPredicted RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 ARHGEF28Q8N1W1 1705 aaKnown RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 VIMP08670 466 aaKnown RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 PSMC4P43686 418 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 SERPINB4P48594 390 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 ATP11AP98196 1134 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 PABPC1LQ4VXU2 614 aaKnown RBP11.77□□□□□ -0.53
TRERF1-203ENST00000372917 JAKMIP2Q96AA8 810 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 CLMNQ96JQ2 1002 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 STAP2Q9UGK3 403 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 ZNF180Q9UJW8 692 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 SAR1BQ9Y6B6 198 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 MROH1Q8NDA8 1641 aa11.77□□□□□ -0.53
TRERF1-203ENST00000372917 PHF20L1A8MW92 1017 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 IKBKBO14920 756 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 ABCC3O15438 1527 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 USO1O60763 962 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 HIP1RO75146 1068 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 HOXD11P31277 338 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 CKAP4Q07065 602 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 BTG3Q14201 252 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 NBPF14Q5TI25 921 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 ARHGAP27Q6ZUM4 889 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 STAG2Q8N3U4 1231 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 KDRP35968 1356 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 A8MUI8 341 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 P4HA2O15460 535 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 TRIM37O94972 964 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 PSMA5P28066 241 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 LACTBP83111 547 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 RIPK1Q13546 671 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 SLC44A4Q53GD3 710 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 LACTB2Q53H82 288 aaPredicted RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 OLFML2BQ68BL8 750 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 FBF1Q8TES7 1133 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 KCNN1Q92952 543 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 NDST4Q9H3R1 872 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 EIF4ENIF1Q9NRA8 985 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 THRAP3Q9Y2W1 955 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 ARHGEF40Q8TER5 1519 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 EPB41P11171 864 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 TMOD1P28289 359 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 TSR1Q2NL82 804 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 CXorf38Q8TB03 319 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 AENQ8WTP8 325 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 LSG1Q9H089 658 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 CARD9Q9H257 536 aa11.76□□□□□ -0.53
TRERF1-203ENST00000372917 TTF2Q9UNY4 1162 aaKnown RBP11.76□□□□□ -0.53
TRERF1-203ENST00000372917 CDC42BPGQ6DT37 1551 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 GOLGA6L10A0A0M3HER8 536 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 IGBP1P78318 339 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 GUCY2DQ02846 1103 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 TAF7Q15545 349 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 SMUG1Q53HV7 270 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 ARFGAP2Q8N6H7 521 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 PCDH18Q9HCL0 1135 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 SCOCQ9UIL1 159 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 RCOR1Q9UKL0 485 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 CDK12Q9NYV4 1490 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 PPIP5K2O43314 1243 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 MYCLP1P12525 358 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 KCNJ2P63252 427 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 STK38Q15208 465 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 RBM26Q5T8P6 1007 aaKnown RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 AACSQ86V21 672 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 APLFQ8IW19 511 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 WDR75Q8IWA0 830 aaKnown RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 ANKS4BQ8N8V4 417 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 CCT6BQ92526 530 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 SLTMQ9NWH9 1034 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 R3HDM2Q9Y2K5 976 aaKnown RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 CAMSAP1Q5T5Y3 1602 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 CCT8L1PA6NM43 557 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 WASLO00401 505 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 ALDH5A1P51649 535 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 TTC30AQ86WT1 665 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 FMR1NBQ8N0W7 255 aaPredicted RBP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 JADE2Q9NQC1 790 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 INTS13Q9NVM9 706 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP11.75□□□□□ -0.53
TRERF1-203ENST00000372917 CEP126Q9P2H0 1117 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 N6AMT1Q9Y5N5 214 aa11.75□□□□□ -0.53
TRERF1-203ENST00000372917 POSTNQ15063 836 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 EZH2Q15910 746 aaKnown RBP11.74□□□□□ -0.53
TRERF1-203ENST00000372917 PPP1R42Q7Z4L9 355 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 KIF2BQ8N4N8 673 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 ZNF653Q96CK0 615 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 NEUROD6Q96NK8 337 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 OXCT2Q9BYC2 517 aaPredicted RBP11.74□□□□□ -0.53
TRERF1-203ENST00000372917 EDC4Q6P2E9 1401 aaKnown RBP11.74□□□□□ -0.53
TRERF1-203ENST00000372917 SLC27A2O14975 620 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 GIGYF1O75420 1035 aaPredicted RBP11.74□□□□□ -0.53
TRERF1-203ENST00000372917 HOXD12P35452 270 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 HDAC4P56524 1084 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 SH2D4BQ5SQS7 431 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 STK11IPQ8N1F8 1099 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 ABTB2Q8N961 1025 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 P3H4Q92791 437 aa11.74□□□□□ -0.53
TRERF1-203ENST00000372917 ABHD8Q96I13 439 aa11.74□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 17 ms