RNA–Protein interactions for RNA: ENST00000372242.7

TMEM53-203, Transcript of transmembrane protein 53, humanhuman

TSL 3 BASIC

Gene TMEM53, Length 1,846 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-203ENST00000372242 SLKQ9H2G2 1235 aaPredicted RBP18.97■□□□□ 0.63
TMEM53-203ENST00000372242 RIOX1Q9H6W3 641 aa18.97■□□□□ 0.63
TMEM53-203ENST00000372242 LIMCH1Q9UPQ0 1083 aa18.97■□□□□ 0.63
TMEM53-203ENST00000372242 ZNF536O15090 1300 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 NID2Q14112 1375 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 hCG_1642624A0A1W2PR95 340 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 DTNBO60941 627 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 CDC37Q16543 378 aaPredicted RBP18.96■□□□□ 0.63
TMEM53-203ENST00000372242 PIGSQ96S52 555 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 LZTS2Q9BRK4 669 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 SPZ1Q9BXG8 430 aa18.96■□□□□ 0.63
TMEM53-203ENST00000372242 CCDC196A0A1B0GTZ2 297 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 PFKFB2O60825 505 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 FDX1P10109 184 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 STAT3P40763 770 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 SP3Q02447 781 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 SCRN1Q12765 414 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 PPP2R5BQ15173 497 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 SNRNP48Q6IEG0 339 aaKnown RBP18.95■□□□□ 0.62
TMEM53-203ENST00000372242 ZNF296Q8WUU4 475 aaPredicted RBP18.95■□□□□ 0.62
TMEM53-203ENST00000372242 MOV10L1Q9BXT6 1211 aaKnown RBP18.95■□□□□ 0.62
TMEM53-203ENST00000372242 PORCNQ9H237 461 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 RIPK3Q9Y572 518 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 FUT2Q10981 343 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 QRICH1Q2TAL8 776 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 ARHGAP39Q9C0H5 1083 aa18.95■□□□□ 0.62
TMEM53-203ENST00000372242 HSPA8P11142 646 aaKnown RBP18.94■□□□□ 0.62
TMEM53-203ENST00000372242 LACTBP83111 547 aaPredicted RBP18.94■□□□□ 0.62
TMEM53-203ENST00000372242 CAP1Q01518 475 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 NTRK3Q16288 839 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 MTMR8Q96EF0 704 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 TEX13BQ9BXU2 312 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 EFCC1Q9HA90 598 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 CNTNAP5Q8WYK1 1306 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 ZSWIM8A7E2V4 1837 aa18.94■□□□□ 0.62
TMEM53-203ENST00000372242 ATP2A1O14983 1001 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 PPP1R11O60927 126 aaPredicted RBP18.93■□□□□ 0.62
TMEM53-203ENST00000372242 FKTNO75072 461 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 ICAM1P05362 532 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 SMARCA1P28370 1054 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 CTGFP29279 349 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 LBX1P52954 281 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 USH1GQ495M9 461 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 WDR78Q5VTH9 848 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 PHKBQ93100 1093 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 HOMER2Q9NSB8 354 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 CCPG1Q9ULG6 757 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 SMCHD1A6NHR9 2005 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 CPLX1O14810 134 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 ZBTB5O15062 677 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 ERCC3P19447 782 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 OAZ1P54368 228 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 CCNA1P78396 465 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 NOM1Q5C9Z4 860 aaKnown RBP18.93■□□□□ 0.62
TMEM53-203ENST00000372242 NCAPG2Q86XI2 1143 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 CCAR1Q8IX12 1150 aaKnown RBP18.93■□□□□ 0.62
TMEM53-203ENST00000372242 CD99L2Q8TCZ2 262 aa18.93■□□□□ 0.62
TMEM53-203ENST00000372242 RRP36Q96EU6 259 aaKnown RBP18.93■□□□□ 0.62
TMEM53-203ENST00000372242 V9GY48 417 aaPredicted RBP18.93■□□□□ 0.62
TMEM53-203ENST00000372242 MYH6P13533 1939 aa18.92■□□□□ 0.62
TMEM53-203ENST00000372242 ALAS1P13196 640 aa18.92■□□□□ 0.62
TMEM53-203ENST00000372242 CTCFP49711 727 aaPredicted RBP18.92■□□□□ 0.62
TMEM53-203ENST00000372242 ST3GAL1Q11201 340 aa18.92■□□□□ 0.62
TMEM53-203ENST00000372242 RIOX2Q8IUF8 465 aa18.92■□□□□ 0.62
TMEM53-203ENST00000372242 IL27Q8NEV9 243 aa18.92■□□□□ 0.62
TMEM53-203ENST00000372242 GTF3C6Q969F1 213 aa18.92■□□□□ 0.62
TMEM53-203ENST00000372242 PNMA6FA0A0J9YX94 578 aa18.91■□□□□ 0.62
TMEM53-203ENST00000372242 PSMC4P43686 418 aa18.91■□□□□ 0.62
TMEM53-203ENST00000372242 FBXO11Q86XK2 927 aa18.91■□□□□ 0.62
TMEM53-203ENST00000372242 ZSCAN31Q96LW9 406 aaPredicted RBP18.91■□□□□ 0.62
TMEM53-203ENST00000372242 IFNAR1P17181 557 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 CCDC83Q8IWF9 413 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 TMX3Q96JJ7 454 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 TRIM47Q96LD4 638 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 SLC26A6Q9BXS9 759 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 SEC63Q9UGP8 760 aaKnown RBP18.9■□□□□ 0.62
TMEM53-203ENST00000372242 CASP8AP2Q9UKL3 1982 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 CTDNEP1O95476 244 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 SLC25A27O95847 323 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 KIF22Q14807 665 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 MUM1L1Q5H9M0 696 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 TRERF1Q96PN7 1200 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 AMNQ9BXJ7 453 aa18.9■□□□□ 0.62
TMEM53-203ENST00000372242 FMNL1O95466 1100 aaPredicted RBP18.89■□□□□ 0.61
TMEM53-203ENST00000372242 MAPK4P31152 587 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 MCM2P49736 904 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 GPR142Q7Z601 462 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 SHCBP1Q8NEM2 672 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 COA7Q96BR5 231 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 MROH8Q9H579 483 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 SH2B1Q9NRF2 756 aaPredicted RBP18.89■□□□□ 0.61
TMEM53-203ENST00000372242 RNF146Q9NTX7 359 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 PCDHA1Q9Y5I3 950 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 MGAMO43451 1857 aa18.89■□□□□ 0.61
TMEM53-203ENST00000372242 TNPO2O14787 897 aaKnown RBP18.88■□□□□ 0.61
TMEM53-203ENST00000372242 FCGRTP55899 365 aa18.88■□□□□ 0.61
TMEM53-203ENST00000372242 CPLX2Q6PUV4 134 aaKnown RBP18.88■□□□□ 0.61
TMEM53-203ENST00000372242 GPKOWQ92917 476 aaPredicted RBP eCLIP18.88■□□□□ 0.61
TMEM53-203ENST00000372242 ERO1AQ96HE7 468 aa18.88■□□□□ 0.61
TMEM53-203ENST00000372242 CWC22Q9HCG8 908 aaKnown RBP18.88■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms