RNA–Protein interactions for RNA: ENST00000372195.5

RAPGEF1-203, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,256 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-203ENST00000372195 PTPRTO14522 1441 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 RGS12O14924 1447 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 DNM2P50570 870 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 YARSP54577 528 aaKnown RBP26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 SH2D4BQ5SQS7 431 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 XKR9Q5GH70 373 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 CCDC127Q96BQ5 260 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 CARD10Q9BWT7 1032 aa26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 NUCKS1Q9H1E3 243 aaKnown RBP26.29■■□□□ 1.8
RAPGEF1-203ENST00000372195 SYNJ2BP-COX16A0A087WUM0 186 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 GOLGA8KD6RF30 607 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 ADAM9Q13443 819 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 LGSNQ5TDP6 509 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 COX16Q9P0S2 106 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 ZNF500O60304 480 aaPredicted RBP26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 NEK8Q86SG6 692 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 EPB41L3Q9Y2J2 1087 aaPredicted RBP26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 BTDP43251 543 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 PHKA1P46020 1223 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 EHHADHQ08426 723 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 ATP8A2Q9NTI2 1148 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 STAM2O75886 525 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 BAG2O95816 211 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 LIG4P49917 911 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 CHRNDQ07001 517 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 GUCY2DQ02846 1103 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 PARP2Q9UGN5 583 aa26.28■■□□□ 1.8
RAPGEF1-203ENST00000372195 EFCAB8A8MWE9 144 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 RPS8P62241 208 aaKnown RBP26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 SLC35F6Q8N357 371 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 PRAMEF22A3QJZ6 481 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 COPB1P53618 953 aaKnown RBP26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 PPM1KQ8N3J5 372 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 AFAP1L2Q8N4X5 818 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 SESTD1Q86VW0 696 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 KIAA0232Q92628 1395 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 LLGL1Q15334 1064 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 LRRC41Q15345 812 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 CNOT6LQ96LI5 555 aaKnown RBP26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 KIF24Q5T7B8 1368 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 DLGAP5Q15398 846 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 MUM1Q2TAK8 710 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 OTUD6AQ7L8S5 288 aa26.27■■□□□ 1.8
RAPGEF1-203ENST00000372195 THAP12O43422 761 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 MAP2K2P36507 400 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 SPATA1Q5VX52 437 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 CCDC125Q86Z20 511 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 ARMCX3Q9UH62 379 aaPredicted RBP26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 GTPBP6O43824 516 aaPredicted RBP26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 POLA2Q14181 598 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 RNF169Q8NCN4 708 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 PPIP5K2O43314 1243 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 RNF40O75150 1001 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 C2orf54Q08AI8 447 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 GJA10Q969M2 543 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 RNF123Q5XPI4 1314 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 SATB1Q01826 763 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 CCDC38Q502W7 563 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 ANKFY1Q9P2R3 1169 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 PDE6CP51160 858 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 SSH2Q76I76 1423 aa26.26■■□□□ 1.79
RAPGEF1-203ENST00000372195 PHKG2P15735 406 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 DPCR1Q3MIW9 517 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 TRPC6Q9Y210 931 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 KIAA0825Q8IV33 1275 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 BCAS4Q8TDM0 211 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 GBP7Q8N8V2 638 aaPredicted RBP26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 STK32BQ9NY57 414 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 A6NNZ2 444 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 ABL1P00519 1130 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 CXCR5P32302 372 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 SLC12A2P55011 1212 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 TUBB8Q3ZCM7 444 aa26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 EPN1Q9Y6I3 576 aaPredicted RBP26.25■■□□□ 1.79
RAPGEF1-203ENST00000372195 EFCC1Q9HA90 598 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 NPC1L1Q9UHC9 1359 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 ARHGAP24Q8N264 748 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 TBX22Q9Y458 520 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 SHANK2Q9UPX8 1470 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 KIF3CO14782 793 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 RFC1P35251 1148 aaPredicted RBP26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 ZBTB38Q8NAP3 1195 aaPredicted RBP26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 MICAL1Q8TDZ2 1067 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 H7C1D1 291 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 PPFIA4O75335 1185 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 ITKQ08881 620 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 TTBK2Q6IQ55 1244 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 MLXIPQ9HAP2 919 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 TROVE2P10155 538 aaKnown RBP eCLIP26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 DYNLL1P63167 89 aaKnown RBP26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 PHLDB2Q86SQ0 1253 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 CROCCP2Q86T23 111 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 MAIP1Q8WWC4 291 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 ANTXR1Q9H6X2 564 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 KIAA1024Q9UPX6 916 aa26.24■■□□□ 1.79
RAPGEF1-203ENST00000372195 TEKT1Q969V4 418 aa26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 RIOK1Q9BRS2 568 aaKnown RBP26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 RBM6P78332 1123 aaKnown RBP26.23■■□□□ 1.79
RAPGEF1-203ENST00000372195 NSMCE1Q8WV22 266 aa26.23■■□□□ 1.79
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms