RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 USP17L10C9JJH3 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 IL1R1P14778 569 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 ZNF18P17022 549 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 BRD2P25440 801 aaKnown RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USH1GQ495M9 461 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 PDXDC2PQ6P474 469 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 SLF2Q8IX21 1173 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 SRRTQ9BXP5 876 aaKnown RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 SLC39A2Q9NP94 309 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 TFR2Q9UP52 801 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 NID2Q14112 1375 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 FAM170AA1A519 330 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 FCER1AP12319 257 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 CACNB1Q02641 598 aaPredicted RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 KRT31Q15323 416 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 KMT5BQ4FZB7 885 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 CDC42EP5Q6NZY7 148 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 MNS1Q8NEH6 495 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 LRRC15Q8TF66 581 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 CDK5RAP3Q96JB5 506 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 WDR24Q96S15 920 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 BTAF1O14981 1849 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L15C9J2P7 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L13C9JLJ4 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 AKR1B15C9JRZ8 316 aaPredicted RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L11C9JVI0 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L18D6R9N7 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L22D6RA61 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L17D6RBQ6 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L19D6RCP7 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L20D6RJB6 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 TFRCP02786 760 aaKnown RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 PDHBP11177 359 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 ADRA2BP18089 450 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L24Q0WX57 530 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 ZYXQ15942 572 aaKnown RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 USP17L6PQ6QN14 398 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 TRMT1LQ7Z2T5 733 aaKnown RBP13.24□□□□□ -0.29
PDE6C-201ENST00000371447 CERKQ8TCT0 537 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 TBC1D22AQ8WUA7 517 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 CARD6Q9BX69 1037 aa13.24□□□□□ -0.29
PDE6C-201ENST00000371447 SRGNP10124 158 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 FXR1P51114 621 aaKnown RBP eCLIP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 PDE4DQ08499 809 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 E2F4Q16254 413 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 NEK8Q86SG6 692 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 MTMR4Q9NYA4 1195 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 KCNJ18B7U540 433 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 RNF225M0QZC1 329 aaPredicted RBP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 GTPBP6O43824 516 aaPredicted RBP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 OR52Z1P0C646 297 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 KCNJ12Q14500 433 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 LRRC41Q15345 812 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 C2CD5Q86YS7 1000 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 C4orf32Q8N8J7 132 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 ACRBPQ8NEB7 543 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 ATP6V0A2Q9Y487 856 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 ERCC5P28715 1186 aaPredicted RBP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 GNA11P29992 359 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 ETF1P62495 437 aaKnown RBP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 NAALADL2Q58DX5 795 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 NT5DC1Q5TFE4 455 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 TRIML1Q8N9V2 468 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 TEKT1Q969V4 418 aa13.23□□□□□ -0.29
PDE6C-201ENST00000371447 TDRD3Q9H7E2 651 aaKnown RBP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 TNRC6CQ9HCJ0 1690 aaKnown RBP13.23□□□□□ -0.29
PDE6C-201ENST00000371447 SLC37A4O43826 429 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 SLU7O95391 586 aaKnown RBP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 ABL1P00519 1130 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 LONP1P36776 959 aaKnown RBP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 NR1I3Q14994 352 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 AOC3Q16853 763 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 SLC30A10Q6XR72 485 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 SH3RF1Q7Z6J0 888 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 CCDC12Q8WUD4 166 aaPredicted RBP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 PPP1R1BQ9UD71 204 aaPredicted RBP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 DOCK2Q92608 1830 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 CLRN2A0PK11 232 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 GTF2F1P35269 517 aaKnown RBP eCLIP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 TRAPPC10P48553 1259 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 MCM6Q14566 821 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 ADGRF4Q8IZF3 695 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 ANKRD20A12PQ8NF67 263 aa13.22□□□□□ -0.29
PDE6C-201ENST00000371447 MRPL44Q9H9J2 332 aaKnown RBP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 PDS5AQ29RF7 1337 aaKnown RBP13.22□□□□□ -0.29
PDE6C-201ENST00000371447 FANCGO15287 622 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 ARHGAP6O43182 974 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 CALCRLQ16602 461 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 TEX35Q5T0J7 233 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 RAD9BQ6WBX8 426 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 SP8Q8IXZ3 490 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 NUDT12Q9BQG2 462 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 SLF1Q9BQI6 1058 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 PDGFDQ9GZP0 370 aaPredicted RBP13.21□□□□□ -0.29
PDE6C-201ENST00000371447 LRWD1Q9UFC0 647 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 MYH6P13533 1939 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 DDTLA6NHG4 134 aaPredicted RBP13.21□□□□□ -0.29
PDE6C-201ENST00000371447 NKRFO15226 690 aaKnown RBP eCLIP13.21□□□□□ -0.29
PDE6C-201ENST00000371447 HLA-DOAP06340 250 aa13.21□□□□□ -0.29
PDE6C-201ENST00000371447 TPM1P09493 284 aa13.21□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 15 ms