RNA–Protein interactions for RNA: ENST00000371196.6

CTCFL-202, Transcript of CCCTC-binding factor like, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CTCFL, Length 3,491 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-202ENST00000371196 INCENPQ9NQS7 918 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 HAUS2Q9NVX0 235 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 LRWD1Q9UFC0 647 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 DNM1LO00429 736 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 DEXIO95424 95 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 CXCR5P32302 372 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 SLC8A1P32418 973 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 IRX1P78414 480 aaPredicted RBP12.94□□□□□ -0.34
CTCFL-202ENST00000371196 CCDC96Q2M329 555 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 NFRKBQ6P4R8 1299 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 PSMB7Q99436 277 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 OSBPL7Q9BZF2 842 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 BCCIPQ9P287 314 aaKnown RBP eCLIP12.94□□□□□ -0.34
CTCFL-202ENST00000371196 NFU1Q9UMS0 254 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 CAPN6Q9Y6Q1 641 aa12.94□□□□□ -0.34
CTCFL-202ENST00000371196 H7C1W4 665 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 FAM153BP0C7A2 387 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 TCP1P17987 556 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 ATF3P18847 181 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 PAFAH1B1P43034 410 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 C11orf91Q3C1V1 193 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 FAM153CQ494X1 144 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 ZNF658Q5TYW1 1059 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 PPP4R3AQ6IN85 833 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 IFT20Q8IY31 132 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 CMTR1Q8N1G2 835 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 FERMT2Q96AC1 680 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 EHD2Q9NZN4 543 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 FAM153AQ9UHL3 310 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 FAM205CA6NFA0 338 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 HMGB1P1B2RPK0 211 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 USO1O60763 962 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 TRIM21P19474 475 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 CARSP49589 748 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 ITGB3BPQ13352 177 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 NAA25Q14CX7 972 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 PI16Q6UXB8 463 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 KIRREL3Q8IZU9 778 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 PIK3R5Q8WYR1 880 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 IQSEC3Q9UPP2 1182 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 TMEM94Q12767 1356 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 SIPA1L3O60292 1781 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 NUTM2BA6NNL0 878 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 NUTM2EB1AL46 878 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 PATL2C9JE40 543 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 GBP2P32456 591 aaPredicted RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 PRCPP42785 496 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 SPA17Q15506 151 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 SPRED3Q2MJR0 410 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 GLE1Q53GS7 698 aaKnown RBP12.93□□□□□ -0.34
CTCFL-202ENST00000371196 ZSWIM5Q9P217 1185 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 HYOU1Q9Y4L1 999 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 C5P01031 1676 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 USP54Q70EL1 1684 aa12.93□□□□□ -0.34
CTCFL-202ENST00000371196 RPSAP08865 295 aaKnown RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 RTN1Q16799 776 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 ANKRD20A8PQ5CZ79 823 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 CRACR2BQ8N4Y2 399 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 C1orf131Q8NDD1 294 aaKnown RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 IFT81Q8WYA0 676 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 RBM12Q9NTZ6 932 aaKnown RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 GDAQ9Y2T3 454 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 ANKRD18BA2A2Z9 1011 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 TRIM49BA6NDI0 452 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 CIAO1O76071 339 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 GLI1P08151 1106 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 HPDP32754 393 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 DNM2P50570 870 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 IFFO1Q0D2I5 559 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 ZNF496Q96IT1 587 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 DDX24Q9GZR7 859 aaKnown RBP eCLIP12.92□□□□□ -0.341e-6■□□□□ 10.8
CTCFL-202ENST00000371196 GMNCA6NCL1 334 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 ZNF263O14978 683 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 GTPBP6O43824 516 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 MOCS3O95396 460 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 PAK2Q13177 524 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 ZKSCAN8Q15776 578 aaPredicted RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 KRT26Q7Z3Y9 468 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 CCDC42Q96M95 316 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 MTRQ99707 1265 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 TTYH3Q9C0H2 523 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 MLXIPQ9HAP2 919 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 EPB41L5Q9HCM4 733 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 GDF3Q9NR23 364 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 PHF8Q9UPP1 1060 aa12.92□□□□□ -0.34
CTCFL-202ENST00000371196 PDS5AQ29RF7 1337 aaKnown RBP12.92□□□□□ -0.34
CTCFL-202ENST00000371196 PPP1R12BO60237 982 aaPredicted RBP12.91□□□□□ -0.34
CTCFL-202ENST00000371196 CLSTN1O94985 981 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 EEF1GP26641 437 aaKnown RBP12.91□□□□□ -0.34
CTCFL-202ENST00000371196 GUCY2FP51841 1108 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 ZBED6P86452 979 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 MREGQ8N565 214 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 RNF217Q8TC41 542 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 NUP58Q9BVL2 599 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 SH2D4AQ9H788 454 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 RBM28Q9NW13 759 aaKnown RBP12.91□□□□□ -0.34
CTCFL-202ENST00000371196 RMND1Q9NWS8 449 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 ESYT3A0FGR9 886 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 SCTRP47872 440 aa12.91□□□□□ -0.34
CTCFL-202ENST00000371196 CCNHP51946 323 aaPredicted RBP12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms