RNA–Protein interactions for RNA: ENST00000369984.4

HCFC1-202, Transcript of host cell factor C1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene HCFC1, Length 8,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1-202ENST00000369984 ZBED4O75132 1171 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 DCAF5Q96JK2 942 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 METTL22Q9BUU2 404 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-202ENST00000369984 ZBTB7BO15156 539 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-202ENST00000369984 GNPATO15228 680 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 DMP1Q13316 513 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-202ENST00000369984 KRT40Q6A162 431 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 SGK1O00141 431 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 IFT88Q13099 833 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 KCTD16Q68DU8 428 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 SCYL3Q8IZE3 742 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 NME8Q8N427 588 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 CCT5P48643 541 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 TRAPPC3LQ5T215 181 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 ADALQ6DHV7 355 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 TMTC3Q6ZXV5 915 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 MYOCDQ8IZQ8 938 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 C1orf112Q9NSG2 853 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 GGA1Q9UJY5 639 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 MAD1L1Q9Y6D9 718 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 YTHDC2Q9H6S0 1430 aaKnown RBP13.61□□□□□ -0.23
HCFC1-202ENST00000369984 PPP1R12AO14974 1030 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-202ENST00000369984 USP6NLQ92738 828 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.61□□□□□ -0.23
HCFC1-202ENST00000369984 ANAPC5Q9UJX4 755 aa13.61□□□□□ -0.23
HCFC1-202ENST00000369984 SGSM2O43147 1006 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 RNMTO43148 476 aaKnown RBP13.6□□□□□ -0.23
HCFC1-202ENST00000369984 INHBAP08476 426 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 IL9RQ01113 521 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 PRPSAP1Q14558 356 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 KCNG1Q9UIX4 513 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 ZNF532Q9HCE3 1301 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 OTUD7AQ8TE49 926 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-202ENST00000369984 SERTAD1Q9UHV2 236 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 GCC2Q8IWJ2 1684 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 EEF1GP26641 437 aaKnown RBP13.6□□□□□ -0.23
HCFC1-202ENST00000369984 PRAG1Q86YV5 1406 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 E7EWF7 191 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 POC1B-GALNT4F8VUJ3 575 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 EYA2O00167 538 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 N4BP1O75113 896 aaKnown RBP13.6□□□□□ -0.23
HCFC1-202ENST00000369984 GUCY2DQ02846 1103 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 ARHGEF16Q5VV41 709 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 SPATA5Q8NB90 893 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 PLBD2Q8NHP8 589 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 RUNDC3BQ96NL0 473 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 CSRNP1Q96S65 589 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 GNGT2O14610 69 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 PIK3CAP42336 1068 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 PDZD4Q76G19 769 aaPredicted RBP13.6□□□□□ -0.23
HCFC1-202ENST00000369984 DEPTORQ8TB45 409 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 PIK3R5Q8WYR1 880 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 CDKL2Q92772 493 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 IFT122Q9HBG6 1241 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 GIMAP4Q9NUV9 329 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 LIG4P49917 911 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 SPZ1Q9BXG8 430 aa13.6□□□□□ -0.23
HCFC1-202ENST00000369984 SMCO2A6NFE2 343 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 NLRX1Q86UT6 975 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 HMGXB3Q12766 1538 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 SYCP2Q9BX26 1530 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 CCDC197Q8NCU1 140 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 TAF5LO75529 589 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 S100BP04271 92 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-202ENST00000369984 SLFN12Q8IYM2 578 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 KDRP35968 1356 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 PDE8AO60658 829 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 ESRRGP62508 458 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 TGFBRAP1Q8WUH2 860 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 DENND4BO75064 1496 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-202ENST00000369984 K7ENM7 598 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 KRT10P13645 584 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 PFKFB1P16118 471 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 INTS9Q9NV88 658 aaKnown RBP13.59□□□□□ -0.23
HCFC1-202ENST00000369984 NDUFB9Q9Y6M9 179 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 NUP160Q12769 1436 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 GOLGA8CPA6NN73 597 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 DLATP10515 647 aaKnown RBP13.59□□□□□ -0.23
HCFC1-202ENST00000369984 RSBN1LQ6PCB5 846 aaPredicted RBP13.59□□□□□ -0.23
HCFC1-202ENST00000369984 KBTBD3Q8NAB2 608 aa13.59□□□□□ -0.23
HCFC1-202ENST00000369984 CCDC124Q96CT7 223 aaKnown RBP13.59□□□□□ -0.23
HCFC1-202ENST00000369984 TNNC2P02585 160 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 ASPHQ12797 758 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 BFSP1Q12934 665 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 ME3Q16798 604 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 HP1BP3Q5SSJ5 553 aaPredicted RBP13.58□□□□□ -0.23
HCFC1-202ENST00000369984 HINFPQ9BQA5 517 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 PCDHA12Q9UN75 941 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 DMRT2Q9Y5R5 561 aa13.58□□□□□ -0.23
HCFC1-202ENST00000369984 BBOF1Q8ND07 529 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 UHMK1Q8TAS1 419 aaKnown RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 DDX25Q9UHL0 483 aaKnown RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 POLR2FP61218 127 aaKnown RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 GADD45GIP1Q8TAE8 222 aaPredicted RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 BZW2Q9Y6E2 419 aaKnown RBP13.58□□□□□ -0.24
HCFC1-202ENST00000369984 UGGT2Q9NYU1 1516 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 PIK3C2GO75747 1445 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 MROH5Q6ZUA9 1318 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 A6NJR5 290 aa13.58□□□□□ -0.24
HCFC1-202ENST00000369984 TCP1P17987 556 aaKnown RBP13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms