RNA–Protein interactions for RNA: ENST00000369603.9

SMNDC1-202, Transcript of survival motor neuron domain containing 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMNDC1, Length 4,341 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-202ENST00000369603 POLR2MP0CAP2 368 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 EPB41P11171 864 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 DESP17661 470 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 EVCP57679 992 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 ENOX2Q16206 610 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 PPP1R18Q6NYC8 613 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 USP17L2Q6R6M4 530 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 MCF2L2Q86YR7 1114 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TRMT44Q8IYL2 757 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 ENOX1Q8TC92 643 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 MAP3K14Q99558 947 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 EIF4ENIF1Q9NRA8 985 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 MAPK8IP1Q9UQF2 711 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CTAGE15A4D2H0 777 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 ARHGEF35A5YM69 484 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CTAGE8P0CG41 777 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 PPP4CP60510 307 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 MORC3Q14149 939 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 ZYXQ15942 572 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 C11orf57Q6ZUT1 292 aaPredicted RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 KRT26Q7Z3Y9 468 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CTAGE6Q86UF2 777 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CTAGE4Q8IX94 777 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 DCAF4Q8WV16 495 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 SLC4A9Q96Q91 983 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 BPIFA3Q9BQP9 254 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 NUCKS1Q9H1E3 243 aaKnown RBP5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 JADE2Q9NQC1 790 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 BMP3P12645 472 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 DNM2P50570 870 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 SEMA3FQ13275 785 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 PLS1Q14651 629 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 SYT10Q6XYQ8 523 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 LRRC8AQ8IWT6 810 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TBCKQ8TEA7 893 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 KIFC2Q96AC6 838 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 BICD1Q96G01 975 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 CRACR2AQ9BSW2 395 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 GJB4Q9NTQ9 266 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 TAB2Q9NYJ8 693 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 KCNG1Q9UIX4 513 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 FRMD4BQ9Y2L6 1034 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 RABGAP1Q9Y3P9 1069 aa5.93□□□□□ -1.46
SMNDC1-202ENST00000369603 KCNJ18B7U540 433 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 GAS7O60861 476 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 KRT9P35527 623 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 NOP2P46087 812 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 KCNJ12Q14500 433 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 KARSQ15046 597 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 LONRF3Q496Y0 759 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 DYMQ7RTS9 669 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 VGLL2Q8N8G2 317 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 LMBR1Q8WVP7 490 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 DHTKD1Q96HY7 919 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 ECE2O60344 883 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 CTDNEP1O95476 244 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 PRPHP41219 470 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 SMTNP53814 917 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 MYOCDQ8IZQ8 938 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 RASGRP4Q8TDF6 673 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 ERO1AQ96HE7 468 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 SPZ1Q9BXG8 430 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 MAN1B1Q9UKM7 699 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 BCS1LQ9Y276 419 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 FDPSP14324 419 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 EEF1GP26641 437 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 SEPT2Q15019 361 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 ZNF827Q17R98 1081 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 PRR16Q569H4 304 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 AXDND1Q5T1B0 1012 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 UTP14CQ5TAP6 766 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 ZNF658Q5TYW1 1059 aaPredicted RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 STRIP1Q5VSL9 837 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 HHIPL2Q6UWX4 724 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 TRMT1LQ7Z2T5 733 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 FAM160B2Q86V87 743 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 GOLGA1Q92805 767 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 CEP95Q96GE4 821 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 SCLT1Q96NL6 688 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 TSPYL1Q9H0U9 437 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 LZTFL1Q9NQ48 299 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 BARHL2Q9NY43 387 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 EXOC7Q9UPT5 735 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 HPS5Q9UPZ3 1129 aa5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 UTP18Q9Y5J1 556 aaKnown RBP eCLIP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 VIRMAQ69YN4 1812 aaKnown RBP5.92□□□□□ -1.46
SMNDC1-202ENST00000369603 GPR75-ASB3A0A0A6YYF3 556 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 PSDA5PKW4 1024 aaPredicted RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 CHMP2AO43633 222 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 USP8P40818 1118 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SETQ01105 290 aaPredicted RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 AP3B2Q13367 1082 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SKIDA1Q1XH10 827 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 ZNF569Q5MCW4 686 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SYDE2Q5VT97 1194 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 SMIM5Q71RC9 77 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 CPXCR1Q8N123 301 aa5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 LARP4BQ92615 738 aaKnown RBP5.91□□□□□ -1.46
SMNDC1-202ENST00000369603 IWS1Q96ST2 819 aa5.91□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms