RNA–Protein interactions for RNA: ENST00000369407.3

PHGDH-201, Transcript of phosphoglycerate dehydrogenase, humanhuman

TSL 2

Gene PHGDH, Length 3,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-201ENST00000369407 PPFIA1Q13136 1202 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 PPP2R5AQ15172 486 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 ZCRB1Q8TBF4 217 aaKnown RBP13.74□□□□□ -0.21
PHGDH-201ENST00000369407 FAM184BQ9ULE4 1060 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 CAPN11Q9UMQ6 739 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 MTMR7Q9Y216 660 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 KIF13AQ9H1H9 1805 aa13.74□□□□□ -0.21
PHGDH-201ENST00000369407 SHTN1A0MZ66 631 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 EIF3HO15372 352 aaKnown RBP eCLIP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ARID4AP29374 1257 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 KRT83P78385 493 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 APBA1Q02410 837 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 IFIT1BQ5T764 474 aaKnown RBP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 TYW1BQ6NUM6 668 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 CREG2Q8IUH2 290 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 HPS3Q969F9 1004 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 FAM107BQ9H098 131 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 FBXO3Q9UK99 471 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ATRNO75882 1429 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 PKD1L3Q7Z443 1732 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ZSCAN5CA6NGD5 496 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 CPP00450 1065 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 TBC1D8BQ0IIM8 1120 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 FUT2Q10981 343 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 SEC23AQ15436 765 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 NLRP10Q86W26 655 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ZNF507Q8TCN5 953 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 LAMB4A4D0S4 1761 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 NDUFAB1O14561 156 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 PDE6BP35913 854 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ATP2B2Q01814 1243 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 KIF5AQ12840 1032 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 CCDC91Q7Z6B0 441 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 PROSER2Q86WR7 435 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 MS4A14Q96JA4 679 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ZNHIT6Q9NWK9 470 aaKnown RBP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 MAGEC2Q9UBF1 373 aaPredicted RBP13.73□□□□□ -0.21
PHGDH-201ENST00000369407 ASAP1Q9ULH1 1129 aa13.73□□□□□ -0.21
PHGDH-201ENST00000369407 WTIPA6NIX2 430 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-201ENST00000369407 H7C1D1 291 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 UQCRFS1P1P0C7P4 283 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 CYP7A1P22680 504 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 CYLC1P35663 651 aaPredicted RBP13.72□□□□□ -0.21
PHGDH-201ENST00000369407 RNASE9P60153 205 aaKnown RBP13.72□□□□□ -0.21
PHGDH-201ENST00000369407 PUM3Q15397 648 aaKnown RBP13.72□□□□□ -0.21
PHGDH-201ENST00000369407 ADSSL1Q8N142 457 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 TUBGCP2Q9BSJ2 902 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 MYH7P12883 1935 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 H0YHG0 523 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 TMTC2Q8N394 836 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 SPATA4Q8NEY3 305 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 TNFRSF25Q93038 417 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 RUFY1Q96T51 708 aa13.72□□□□□ -0.21
PHGDH-201ENST00000369407 GUCY1A3Q02108 690 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 CATIPQ7Z7H3 387 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 SRBD1Q8N5C6 995 aaKnown RBP13.71□□□□□ -0.21
PHGDH-201ENST00000369407 CSGALNACT2Q8N6G5 542 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 LPIN2Q92539 896 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 GPKOWQ92917 476 aaPredicted RBP eCLIP13.71□□□□□ -0.21
PHGDH-201ENST00000369407 ZSCAN10Q96SZ4 725 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-201ENST00000369407 GLI3P10071 1580 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 DYNLL1P63167 89 aaKnown RBP13.71□□□□□ -0.21
PHGDH-201ENST00000369407 FAM47AQ5JRC9 791 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 CCDC70Q6NSX1 233 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 SUGP1Q8IWZ8 645 aaKnown RBP13.71□□□□□ -0.21
PHGDH-201ENST00000369407 IFT81Q8WYA0 676 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 ESR2Q92731 530 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 CCDC42Q96M95 316 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 FAM207AQ9NSI2 230 aaPredicted RBP13.71□□□□□ -0.21
PHGDH-201ENST00000369407 SNX12Q9UMY4 172 aa13.71□□□□□ -0.21
PHGDH-201ENST00000369407 EPHB6O15197 1021 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 PRPF3O43395 683 aaKnown RBP13.71□□□□□ -0.22
PHGDH-201ENST00000369407 BUB1O43683 1085 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 MTIF2P46199 727 aaKnown RBP13.71□□□□□ -0.22
PHGDH-201ENST00000369407 GUCY2FP51841 1108 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 TMC4Q7Z404 712 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 C2CD5Q86YS7 1000 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 LRRC15Q8TF66 581 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 EXOC1Q9NV70 894 aa13.71□□□□□ -0.22
PHGDH-201ENST00000369407 FAM153BP0C7A2 387 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 SEC24CP53992 1094 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 FAM153CQ494X1 144 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 CCDC181Q5TID7 509 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 ZNF512BQ96KM6 892 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-201ENST00000369407 ZIM3Q96PE6 472 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 PLA2G12BQ9BX93 195 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 FAM153AQ9UHL3 310 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 CAMTA1Q9Y6Y1 1673 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 PDS5AQ29RF7 1337 aaKnown RBP13.7□□□□□ -0.22
PHGDH-201ENST00000369407 NAP1L1P55209 391 aaKnown RBP13.7□□□□□ -0.22
PHGDH-201ENST00000369407 SPA17Q15506 151 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 TRADDQ15628 312 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 NAALADL2Q58DX5 795 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 CCDC178Q5BJE1 867 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 EHBP1Q8NDI1 1231 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 JPH2Q9BR39 696 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-201ENST00000369407 RNF41Q9H4P4 317 aaPredicted RBP13.7□□□□□ -0.22
PHGDH-201ENST00000369407 RMND1Q9NWS8 449 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 SALL4Q9UJQ4 1053 aa13.7□□□□□ -0.22
PHGDH-201ENST00000369407 KIF1AQ12756 1690 aa13.7□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 44.9 ms