RNA–Protein interactions for RNA: ENST00000367621.1

VTA1-201, Transcript of vesicle trafficking 1, humanhuman

TSL 5 BASIC

Gene VTA1, Length 1,284 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTA1-201ENST00000367621 ADAMTS3O15072 1205 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 NDUFB10O96000 172 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 MMP1P03956 469 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 SCG2P13521 617 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 INPP5BP32019 993 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 SLFN13Q68D06 897 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 CCDC84Q86UT8 332 aaPredicted RBP10.97□□□□□ -0.65
VTA1-201ENST00000367621 DCAF4Q8WV16 495 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 TNFRSF25Q93038 417 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 MTMR8Q96EF0 704 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 GMCL1Q96IK5 515 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 PHF20Q9BVI0 1012 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 TAF1DQ9H5J8 278 aaPredicted RBP10.97□□□□□ -0.65
VTA1-201ENST00000367621 GPCPD1Q9NPB8 672 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 GINM1Q9NU53 330 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 VPS54Q9P1Q0 977 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 KIAA1468Q9P260 1216 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 FZD1Q9UP38 647 aa10.97□□□□□ -0.65
VTA1-201ENST00000367621 ARIH1Q9Y4X5 557 aaPredicted RBP10.97□□□□□ -0.65
VTA1-201ENST00000367621 TESPA1A2RU30 521 aaPredicted RBP10.96□□□□□ -0.65
VTA1-201ENST00000367621 DDX11L8A8MPP1 907 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 PRPF40AO75400 957 aaKnown RBP10.96□□□□□ -0.65
VTA1-201ENST00000367621 USP2O75604 605 aaPredicted RBP10.96□□□□□ -0.65
VTA1-201ENST00000367621 ASNSP08243 561 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 WWC2Q6AWC2 1192 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 KCTD1Q719H9 257 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 USP48Q86UV5 1035 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 ZC3H15Q8WU90 426 aaKnown RBP10.96□□□□□ -0.65
VTA1-201ENST00000367621 PIBF1Q8WXW3 757 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 KLRG1Q96E93 195 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 PIGSQ96S52 555 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 NUP88Q99567 741 aaPredicted RBP10.96□□□□□ -0.65
VTA1-201ENST00000367621 EPAS1Q99814 870 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 ZNF341Q9BYN7 854 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 JMJD4Q9H9V9 463 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 GDPD2Q9HCC8 539 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 ATP6V1DQ9Y5K8 247 aa10.96□□□□□ -0.65
VTA1-201ENST00000367621 BTBD18B2RXH4 712 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 STXBP3O00186 592 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 PPP1R11O60927 126 aaPredicted RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 GADD45BO75293 160 aaPredicted RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 SLC16A2P36021 539 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 AKAP17AQ02040 695 aaKnown RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 GPATCH4Q5T3I0 446 aaKnown RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 DCAF15Q66K64 600 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 BTNL9Q6UXG8 535 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 BRAPQ7Z569 592 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 DIS3L2Q8IYB7 885 aaKnown RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 ADGRF4Q8IZF3 695 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 GPKOWQ92917 476 aaPredicted RBP eCLIP10.95□□□□□ -0.66
VTA1-201ENST00000367621 DCPSQ96C86 337 aaKnown RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 FTOQ9C0B1 505 aaKnown RBP eCLIP10.95□□□□□ -0.66
VTA1-201ENST00000367621 SH3GLB2Q9NR46 395 aa10.95□□□□□ -0.66
VTA1-201ENST00000367621 RBM27Q9P2N5 1060 aaKnown RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 TFIP11Q9UBB9 837 aaKnown RBP10.95□□□□□ -0.66
VTA1-201ENST00000367621 USP17L10C9JJH3 530 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 M0R2N6 131 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 SLC1A4P43007 532 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 NR5A1Q13285 461 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 CCDC96Q2M329 555 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 SUPT20HL1Q3ZLR7 823 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 NOM1Q5C9Z4 860 aaKnown RBP10.94□□□□□ -0.66
VTA1-201ENST00000367621 EARS2Q5JPH6 523 aaKnown RBP10.94□□□□□ -0.66
VTA1-201ENST00000367621 NOL9Q5SY16 702 aaKnown RBP10.94□□□□□ -0.66
VTA1-201ENST00000367621 MYSM1Q5VVJ2 828 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 KRT26Q7Z3Y9 468 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 SCYL3Q8IZE3 742 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 DDX55Q8NHQ9 600 aaKnown RBP eCLIP10.94□□□□□ -0.66
VTA1-201ENST00000367621 LEO1Q8WVC0 666 aaPredicted RBP10.94□□□□□ -0.66
VTA1-201ENST00000367621 ZKSCAN4Q969J2 545 aaPredicted RBP10.94□□□□□ -0.66
VTA1-201ENST00000367621 HOOK2Q96ED9 719 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 USP28Q96RU2 1077 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 FOXP1Q9H334 677 aaPredicted RBP10.94□□□□□ -0.66
VTA1-201ENST00000367621 VCPKMTQ9H867 229 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 ARHGEF10LQ9HCE6 1279 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 VAT1LQ9HCJ6 419 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 BARHL2Q9NY43 387 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 RCOR1Q9UKL0 485 aa10.94□□□□□ -0.66
VTA1-201ENST00000367621 PNMA6FA0A0J9YX94 578 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 IQCA1LA6NCM1 817 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 TRAK2O60296 914 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 BMP3P12645 472 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 PTPRAP18433 802 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 TOB1P50616 345 aaPredicted RBP10.93□□□□□ -0.66
VTA1-201ENST00000367621 KCNC4Q03721 635 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 TRIM29Q14134 588 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 C6orf132Q5T0Z8 1188 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 ATL3Q6DD88 541 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 PPP1R3FQ6ZSY5 799 aaPredicted RBP10.93□□□□□ -0.66
VTA1-201ENST00000367621 NOSTRINQ8IVI9 506 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 SULF1Q8IWU6 871 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 SPICE1Q8N0Z3 855 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 GPT2Q8TD30 523 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 RRP36Q96EU6 259 aaKnown RBP10.93□□□□□ -0.66
VTA1-201ENST00000367621 CDCA5Q96FF9 252 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 WRNIP1Q96S55 665 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 WDR18Q9BV38 432 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 KIAA1683Q9H0B3 1180 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 WBP1LQ9NX94 342 aa10.93□□□□□ -0.66
VTA1-201ENST00000367621 RTEL1Q9NZ71 1219 aa10.93□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 10.4 ms