RNA–Protein interactions for RNA: ENST00000365690.4

MIR539-201, microRNA 539, humanhuman

BASIC

Gene MIR539, Length 78 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR539-201ENST00000365690 TREHO43280 583 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 SRGAP3O43295 1099 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 PRAMEF1O95521 474 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 USP17L7P0C7H9 530 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 TGFB2P61812 414 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 PRR5P85299 388 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 RPL6Q02878 288 aaKnown RBP3.03□□□□□ -1.92
MIR539-201ENST00000365690 NBPF9Q3BBW0 867 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 PALM2Q8IXS6 379 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 BCAS3Q9H6U6 928 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 WWC3Q9ULE0 1092 aa3.03□□□□□ -1.92
MIR539-201ENST00000365690 GPR42O15529 346 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 UBOX5O94941 541 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 CYBBP04839 570 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 ACRP10323 421 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 NCAM1P13591 858 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 CTSKP43235 329 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 TNNI2P48788 182 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 YARSP54577 528 aaKnown RBP3.02□□□□□ -1.93
MIR539-201ENST00000365690 NANOS3P60323 173 aaKnown RBP3.02□□□□□ -1.93
MIR539-201ENST00000365690 TSNAXIP1Q2TAA8 658 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 SPDYAQ5MJ70 313 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 LRCH2Q5VUJ6 765 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 KRTAP5-11Q6L8G4 156 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 PAQR3Q6TCH7 311 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 CCDC74BQ96LY2 380 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 KIF2CQ99661 725 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 SYT3Q9BQG1 590 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 IKZF4Q9H2S9 585 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 NTMQ9P121 344 aa3.02□□□□□ -1.93
MIR539-201ENST00000365690 PRR36Q9H6K5 1346 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 SSU72P8A0A1W2PR75 194 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 NPIPB8E9PQR5 432 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 ZNF205O95201 554 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 PMLP29590 882 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 LIG3P49916 1009 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 KRTAP15-1Q3LI76 137 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 RGL3Q3MIN7 710 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 RTP2Q5QGT7 225 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 ZNF585AQ6P3V2 769 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 GLB1LQ6UWU2 654 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 TXNDC2Q86VQ3 553 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 SMARCC2Q8TAQ2 1214 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 EAF1Q96JC9 268 aaPredicted RBP3.01□□□□□ -1.93
MIR539-201ENST00000365690 ASCC2Q9H1I8 757 aaPredicted RBP3.01□□□□□ -1.93
MIR539-201ENST00000365690 C12orf49Q9H741 205 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 AP5S1Q9NUS5 200 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 FAN1Q9Y2M0 1017 aa3.01□□□□□ -1.93
MIR539-201ENST00000365690 GIPC1O14908 333 aa3□□□□□ -1.93
MIR539-201ENST00000365690 SIGLEC6O43699 453 aa3□□□□□ -1.93
MIR539-201ENST00000365690 NBPF12Q5TAG4 269 aaPredicted RBP3□□□□□ -1.93
MIR539-201ENST00000365690 PHACTR4Q8IZ21 702 aa3□□□□□ -1.93
MIR539-201ENST00000365690 LGI4Q8N135 537 aa3□□□□□ -1.93
MIR539-201ENST00000365690 LINC00482Q8N8I6 264 aa3□□□□□ -1.93
MIR539-201ENST00000365690 FBF1Q8TES7 1133 aa3□□□□□ -1.93
MIR539-201ENST00000365690 MIR1-1HGQ9H1L0 117 aa3□□□□□ -1.93
MIR539-201ENST00000365690 FAM8A1Q9UBU6 413 aa3□□□□□ -1.93
MIR539-201ENST00000365690 REV1Q9UBZ9 1251 aa3□□□□□ -1.93
MIR539-201ENST00000365690 TTF2Q9UNY4 1162 aaKnown RBP3□□□□□ -1.93
MIR539-201ENST00000365690 POLR3KQ9Y2Y1 108 aaPredicted RBP3□□□□□ -1.93
MIR539-201ENST00000365690 ZNF536O15090 1300 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 FAM221AA4D161 298 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 F8W031 263 aaPredicted RBP2.99□□□□□ -1.93
MIR539-201ENST00000365690 B4GALT3O60512 393 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 PURAQ00577 322 aaKnown RBP2.99□□□□□ -1.93
MIR539-201ENST00000365690 SMAD4Q13485 552 aaKnown RBP2.99□□□□□ -1.93
MIR539-201ENST00000365690 MAP3K11Q16584 847 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 C9orf131Q5VYM1 1079 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 JARID2Q92833 1246 aaPredicted RBP2.99□□□□□ -1.93
MIR539-201ENST00000365690 ZBTB8AQ96BR9 441 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 CCDC97Q96F63 343 aaPredicted RBP2.99□□□□□ -1.93
MIR539-201ENST00000365690 CEP89Q96ST8 783 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 CDK5RAP1Q96SZ6 601 aaKnown RBP2.99□□□□□ -1.93
MIR539-201ENST00000365690 CDADC1Q9BWV3 514 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 RXFP1Q9HBX9 757 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 KLHL3Q9UH77 587 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 SERPINA10Q9UK55 444 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 TLR6Q9Y2C9 796 aa2.99□□□□□ -1.93
MIR539-201ENST00000365690 MROH6A6NGR9 719 aa2.98□□□□□ -1.93
MIR539-201ENST00000365690 RGS13O14921 159 aa2.98□□□□□ -1.93
MIR539-201ENST00000365690 VAV1P15498 845 aa2.98□□□□□ -1.93
MIR539-201ENST00000365690 BMP8BP34820 402 aa2.98□□□□□ -1.93
MIR539-201ENST00000365690 BNC2Q6ZN30 1099 aaPredicted RBP2.98□□□□□ -1.93
MIR539-201ENST00000365690 ALG3Q92685 438 aa2.98□□□□□ -1.93
MIR539-201ENST00000365690 WDR33Q9C0J8 1336 aaKnown RBP2.97□□□□□ -1.93
MIR539-201ENST00000365690 PATE3B3GLJ2 98 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 MEIS1O00470 390 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 LAMTOR5O43504 91 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 RPL13P26373 211 aaKnown RBP2.97□□□□□ -1.93
MIR539-201ENST00000365690 THBS2P35442 1172 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 IL12RB1P42701 662 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 FMR1Q06787 632 aaKnown RBP eCLIP2.97□□□□□ -1.93
MIR539-201ENST00000365690 KIAA2012Q0VF49 1180 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 CCDC85BQ15834 202 aaPredicted RBP2.97□□□□□ -1.93
MIR539-201ENST00000365690 PRR31Q5SQ13 230 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 BICRALQ6AI39 1079 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 TTLL7Q6ZT98 887 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 IGDCC4Q8TDY8 1250 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 CPA5Q8WXQ8 436 aa2.97□□□□□ -1.93
MIR539-201ENST00000365690 VOPP1Q96AW1 172 aa2.97□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms