RNA–Protein interactions for RNA: ENST00000364738.1

RNU4-42P-201, Transcript of RNA, U4 small nuclear 42, pseudogene, humanhuman

BASIC

Gene RNU4-42P, Length 142 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-42P-201ENST00000364738 NT5C1AQ9BXI3 368 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 PRR13Q9NZ81 148 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 KLHL14Q9P2G3 628 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 IMPACTQ9P2X3 320 aa4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 SUCOQ9UBS9 1254 aaKnown RBP4.29□□□□□ -1.72
RNU4-42P-201ENST00000364738 GSNP06396 782 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 NFIXQ14938 502 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 CWF19L1Q69YN2 538 aaKnown RBP4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 CNKSR3Q6P9H4 555 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 EAF1Q96JC9 268 aaPredicted RBP4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 JMJD8Q96S16 334 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 TNFRSF12AQ9NP84 129 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 RTEL1Q9NZ71 1219 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 ZNRF3Q9ULT6 936 aa4.28□□□□□ -1.72
RNU4-42P-201ENST00000364738 A0A1W2PQ27 194 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 A0A1W2PQ64 194 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 A0A1W2PQC6 194 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 A0A1W2PQD8 194 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 C9IYK1 514 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 SHOXO15266 292 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 IMPDH2P12268 514 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 PLEKHN1Q494U1 663 aaPredicted RBP4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 RTP2Q5QGT7 225 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 LCE5AQ5TCM9 118 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 TDRD10Q5VZ19 366 aaKnown RBP4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 LDHDQ86WU2 507 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 FAM129CQ86XR2 697 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 IGDCC3Q8IVU1 814 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 SP8Q8IXZ3 490 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 C7orf61Q8IZ16 206 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 FERD3LQ96RJ6 166 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 EPB41L4AQ9HCS5 686 aaPredicted RBP4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 ACSL6Q9UKU0 697 aa4.27□□□□□ -1.73
RNU4-42P-201ENST00000364738 OTOL1A6NHN0 477 aaPredicted RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 H0Y8X5 98 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 FOXD2O60548 495 aaPredicted RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 GSTM1P09488 218 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 ACRP10323 421 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 SYN1P17600 705 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 ZNF76P36508 570 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 CEBPAP49715 358 aaPredicted RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 PMS1P54277 932 aaKnown RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 NCKAP1LP55160 1127 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 VMACQ2NL98 169 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 NOL9Q5SY16 702 aaKnown RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 INTS3Q68E01 1043 aaKnown RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 RPTNQ6XPR3 784 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 JAMLQ86YT9 394 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 TMEFF1Q8IYR6 380 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 TMEM87AQ8NBN3 555 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 FEZF2Q8TBJ5 459 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 SMARCC1Q92922 1105 aaPredicted RBP4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 PWWP2AQ96N64 755 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 SLC12A9Q9BXP2 914 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 XYLT2Q9H1B5 865 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 FAM86C1Q9NVL1 165 aa4.26□□□□□ -1.73
RNU4-42P-201ENST00000364738 A0A1W2PQJ5 194 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 BUB1BO60566 1050 aaPredicted RBP4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 MAPKAPK2P49137 400 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 FBXW10Q5XX13 1052 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 HLA-DQA1Q5Y7H0 255 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 DCAF15Q66K64 600 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 ZC3H14Q6PJT7 736 aaKnown RBP4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 USP48Q86UV5 1035 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 PPFIBP1Q86W92 1011 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 TMEM52Q8NDY8 209 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 BRF1Q92994 677 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 TM9SF2Q99805 663 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 KRTAP9-3Q9BYQ3 159 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 PCDHA5Q9Y5H7 936 aa4.25□□□□□ -1.73
RNU4-42P-201ENST00000364738 MSL3P1P0C860 447 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 PFKLP17858 780 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 LIMS1P48059 325 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 ZNF445P59923 1031 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 ZNF200P98182 395 aaPredicted RBP4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 MVKQ03426 396 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 CBX2Q14781 532 aaPredicted RBP4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 NR1I3Q14994 352 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 AXDND1Q5T1B0 1012 aaPredicted RBP4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 ERICH6BQ5W0A0 696 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 BICRALQ6AI39 1079 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 CYP2R1Q6VVX0 501 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 ZDHHC14Q8IZN3 488 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 FIBCD1Q8N539 461 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 TAB3Q8N5C8 712 aaPredicted RBP4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 CXorf38Q8TB03 319 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 SRRTQ9BXP5 876 aaKnown RBP4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 GP6Q9HCN6 339 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 LUC7LQ9NQ29 371 aaKnown RBP4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 PCDHGB7Q9Y5F8 929 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 FHOD1Q9Y613 1164 aa4.24□□□□□ -1.73
RNU4-42P-201ENST00000364738 FGF10O15520 208 aaPredicted RBP4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 SRGAP3O43295 1099 aa4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 TP53P04637 393 aaPredicted RBP4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 CYBBP04839 570 aa4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 CD3EP07766 207 aa4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 ITGA4P13612 1032 aa4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 ZNF16P17020 682 aaPredicted RBP4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 GUCY2CP25092 1073 aa4.23□□□□□ -1.73
RNU4-42P-201ENST00000364738 TACR1P25103 407 aa4.23□□□□□ -1.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms