RNA–Protein interactions for RNA: ENST00000364005.1

RNU6-340P-201, Transcript of RNA, U6 small nuclear 340, pseudogene, humanhuman

BASIC

Gene RNU6-340P, Length 107 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-340P-201ENST00000364005 PCDHA4Q9UN74 947 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 COG6Q9Y2V7 657 aa1.2□□□□□ -2.22
RNU6-340P-201ENST00000364005 RBM47A0AV96 593 aaKnown RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 FADS2P1A8MWK0 482 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 NME2P22392 152 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 RPL13P26373 211 aaKnown RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 KRTAP10-5P60370 271 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 ETF1P62495 437 aaKnown RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 PRR5P85299 388 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 EHHADHQ08426 723 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 FAM69CQ0P6D2 419 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 TUBA3CQ13748 450 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 INPP5AQ14642 412 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 CLEC16AQ2KHT3 1053 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 KLHL22Q53GT1 634 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 SLFN13Q68D06 897 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 LAIR1Q6GTX8 287 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 TUBA3EQ6PEY2 450 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 PAQR3Q6TCH7 311 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZPBP2Q6X784 338 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 ARHGEF18Q6ZSZ5 1173 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 C1orf210Q8IVY1 113 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 WWC1Q8IX03 1113 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 DNAJB8Q8NHS0 232 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 SMARCC2Q8TAQ2 1214 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZNF483Q8TF39 744 aaPredicted RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 SCARB1Q8WTV0 552 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 EAF1Q96JC9 268 aaPredicted RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 DPH2Q9BQC3 489 aaPredicted RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 FOXP3Q9BZS1 431 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 RTN4Q9NQC3 1192 aaKnown RBP1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 TNFRSF10DQ9UBN6 386 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 ACSL6Q9UKU0 697 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 CEP131Q9UPN4 1083 aa1.19□□□□□ -2.22
RNU6-340P-201ENST00000364005 F8W031 263 aaPredicted RBP1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 DDX3XO00571 662 aaKnown RBP eCLIP1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 FKTNO75072 461 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 TRIM37O94972 964 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 CYBBP04839 570 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 CBSLP0DN79 551 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 CBSP35520 551 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 USPL1Q5W0Q7 1092 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 LRFN4Q6PJG9 635 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 SLCO6A1Q86UG4 719 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 LINC00482Q8N8I6 264 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 CACTINQ8WUQ7 758 aaKnown RBP1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 CLIP3Q96DZ5 547 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZNHIT2Q9UHR6 403 aa1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 GPR55Q9Y2T6 319 aaPredicted RBP1.18□□□□□ -2.22
RNU6-340P-201ENST00000364005 SSU72P8A0A1W2PR75 194 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 FOXS1O43638 330 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 LMNAP02545 664 aaKnown RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 DBHP09172 617 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 PROZP22891 400 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 PMLP29590 882 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 THBS2P35442 1172 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 EIF1AXP47813 144 aaKnown RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 PRPF40BQ6NWY9 871 aaKnown RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 CRELD2Q6UXH1 353 aaPredicted RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 HDXQ7Z353 690 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 ADGRG3Q86Y34 549 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 Q8N9P0 234 aaPredicted RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 IL17DQ8TAD2 202 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 ALG3Q92685 438 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 EDAQ92838 391 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 SMARCC1Q92922 1105 aaPredicted RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 PLPPR2Q96GM1 343 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 MEGF9Q9H1U4 602 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 BCAS3Q9H6U6 928 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 UNKLQ9H9P5 680 aaKnown RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 CXXC1Q9P0U4 656 aaPredicted RBP1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 IMPACTQ9P2X3 320 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 RNF7Q9UBF6 113 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 TCFL5Q9UL49 500 aa1.17□□□□□ -2.22
RNU6-340P-201ENST00000364005 A0A1W2PQ45 241 aaPredicted RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 A0A1W2PQY0 241 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 TMEM191CA6NGB0 347 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 C9orf118A6NHY6 69 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 B4GALT4O60513 344 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 BMP6P22004 513 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 GRK4P32298 578 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 USP5P45974 858 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 PCBP3P57721 371 aaKnown RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 CACNB2Q08289 660 aaPredicted RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 AGBL4Q5VU57 503 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 TCTN3Q6NUS6 607 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 DTHD1Q6ZMT9 781 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 RPUSD2Q8IZ73 545 aaKnown RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 ZBTB8BQ8NAP8 495 aaPredicted RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 FCRL2Q96LA5 508 aaPredicted RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 GNRHR2Q96P88 292 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 ADGRE3Q9BY15 652 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 NPHS2Q9NP85 383 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 SEPT3Q9UH03 358 aa1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 DBR1Q9UK59 544 aaKnown RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 REXO2Q9Y3B8 237 aaKnown RBP1.16□□□□□ -2.22
RNU6-340P-201ENST00000364005 ACIN1Q9UKV3 1341 aaKnown RBP1.15□□□□□ -2.22
RNU6-340P-201ENST00000364005 A0A1W2PQ27 194 aa1.15□□□□□ -2.23
RNU6-340P-201ENST00000364005 A0A1W2PQ64 194 aa1.15□□□□□ -2.23
RNU6-340P-201ENST00000364005 A0A1W2PQC6 194 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms