RNA–Protein interactions for RNA: ENST00000362006.11

CCDC7-203, Transcript of coiled-coil domain containing 7, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC7, Length 2,133 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC7-203ENST00000362006 FOXD4L6Q3SYB3 417 aaPredicted RBP20.71■□□□□ 0.91
CCDC7-203ENST00000362006 FOXD4L3Q6VB84 417 aaPredicted RBP20.71■□□□□ 0.91
CCDC7-203ENST00000362006 TEX2Q8IWB9 1127 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 OTUD5Q96G74 571 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 SCAND2PQ9GZW5 306 aaPredicted RBP20.71■□□□□ 0.91
CCDC7-203ENST00000362006 SMCO2A6NFE2 343 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 NPY5RQ15761 445 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 MYSM1Q5VVJ2 828 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 TYW1BQ6NUM6 668 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 PROCA1Q8NCQ7 364 aaPredicted RBP20.71■□□□□ 0.91
CCDC7-203ENST00000362006 PCDHA1Q9Y5I3 950 aa20.71■□□□□ 0.91
CCDC7-203ENST00000362006 PTPRFP10586 1907 aa20.7■□□□□ 0.91
CCDC7-203ENST00000362006 USP17L15C9J2P7 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L13C9JLJ4 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L11C9JVI0 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L18D6R9N7 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L22D6RA61 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L17D6RBQ6 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L19D6RCP7 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L20D6RJB6 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 FLOT1O75955 427 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 NCLP19338 710 aaKnown RBP20.7■□□□□ 0.9
CCDC7-203ENST00000362006 FMR1Q06787 632 aaKnown RBP eCLIP20.7■□□□□ 0.9
CCDC7-203ENST00000362006 USP17L24Q0WX57 530 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 COA7Q96BR5 231 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 OPTNQ96CV9 577 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 PPP1R9AQ9ULJ8 1098 aa20.7■□□□□ 0.9
CCDC7-203ENST00000362006 A0A0G2JLL6 359 aaPredicted RBP20.69■□□□□ 0.9
CCDC7-203ENST00000362006 IRF6O14896 467 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 PPP1R11O60927 126 aaPredicted RBP20.69■□□□□ 0.9
CCDC7-203ENST00000362006 FAM173BQ6P4H8 233 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 PRRT2Q7Z6L0 340 aaPredicted RBP20.69■□□□□ 0.9
CCDC7-203ENST00000362006 ADCY7P51828 1080 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 MRPL12P52815 198 aaKnown RBP20.69■□□□□ 0.9
CCDC7-203ENST00000362006 RILPL1Q5EBL4 403 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 CATSPERGQ6ZRH7 1159 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 OXER1Q8TDS5 423 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 FBXO28Q9NVF7 368 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.69■□□□□ 0.9
CCDC7-203ENST00000362006 MYPNQ86TC9 1320 aa20.69■□□□□ 0.9
CCDC7-203ENST00000362006 NR5A1Q13285 461 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 COG2Q14746 738 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 FASTKD5Q7L8L6 764 aaKnown RBP20.68■□□□□ 0.9
CCDC7-203ENST00000362006 CNKSR2Q8WXI2 1034 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 TNFRSF25Q93038 417 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 RIC8AQ9NPQ8 531 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 HOXC10Q9NYD6 342 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 CNPY2Q9Y2B0 182 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 ZBED4O75132 1171 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 DGKZQ13574 1117 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 TMEM87AQ8NBN3 555 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 CUL5Q93034 780 aa20.68■□□□□ 0.9
CCDC7-203ENST00000362006 NOL7Q9UMY1 257 aaKnown RBP20.68■□□□□ 0.9
CCDC7-203ENST00000362006 CTDP1Q9Y5B0 961 aaPredicted RBP20.68■□□□□ 0.9
CCDC7-203ENST00000362006 LOC285556D6RIA3 1793 aa20.67■□□□□ 0.9
CCDC7-203ENST00000362006 MCTP2Q6DN12 878 aa20.67■□□□□ 0.9
CCDC7-203ENST00000362006 PARP14Q460N5 1801 aa20.67■□□□□ 0.9
CCDC7-203ENST00000362006 M0R2N6 131 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 DSG3P32926 999 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 SNAPC2Q13487 334 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 PSTPIP2Q9H939 334 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 SLC38A10Q9HBR0 1119 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 POLR3EQ9NVU0 708 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 RTEL1Q9NZ71 1219 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 TFIP11Q9UBB9 837 aaKnown RBP20.66■□□□□ 0.9
CCDC7-203ENST00000362006 HOXA7P31268 230 aaPredicted RBP20.66■□□□□ 0.9
CCDC7-203ENST00000362006 TRAPPC10P48553 1259 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 CST9Q5W186 159 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 KRT25Q7Z3Z0 450 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 REXO1Q8N1G1 1221 aaKnown RBP20.66■□□□□ 0.9
CCDC7-203ENST00000362006 SMC1BQ8NDV3 1235 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 CHAMP1Q96JM3 812 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 PCDHA6Q9UN73 950 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 PCDHA8Q9Y5H6 950 aa20.66■□□□□ 0.9
CCDC7-203ENST00000362006 ELP1O95163 1332 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 ABCB11O95342 1321 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 CCDC194A0A1B0GVG4 234 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 ICAM1P05362 532 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 SNAP25P60880 206 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 PABPC4Q13310 644 aaKnown RBP eCLIP20.65■□□□□ 0.9
CCDC7-203ENST00000362006 GADL1Q6ZQY3 521 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 SPATA32Q96LK8 384 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 ADAMTS5Q9UNA0 930 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 MRPL11Q9Y3B7 192 aaKnown RBP20.65■□□□□ 0.9
CCDC7-203ENST00000362006 KIF3CO14782 793 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 FIBPO43427 364 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 CCDC174Q6PII3 467 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 SAMD1Q6SPF0 538 aaPredicted RBP20.65■□□□□ 0.9
CCDC7-203ENST00000362006 WNK4Q96J92 1243 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 USP28Q96RU2 1077 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 RCOR1Q9UKL0 485 aa20.65■□□□□ 0.9
CCDC7-203ENST00000362006 VWA5AO00534 786 aa20.64■□□□□ 0.89
CCDC7-203ENST00000362006 PRPF40AO75400 957 aaKnown RBP20.64■□□□□ 0.89
CCDC7-203ENST00000362006 YEATS4O95619 227 aa20.64■□□□□ 0.89
CCDC7-203ENST00000362006 OAZ1P54368 228 aa20.64■□□□□ 0.89
CCDC7-203ENST00000362006 USH1GQ495M9 461 aa20.64■□□□□ 0.89
CCDC7-203ENST00000362006 AGTPBP1Q9UPW5 1226 aa20.64■□□□□ 0.89
CCDC7-203ENST00000362006 RLFQ13129 1914 aa20.64■□□□□ 0.89
CCDC7-203ENST00000362006 PASKQ96RG2 1323 aa20.63■□□□□ 0.89
CCDC7-203ENST00000362006 ZBTB48P10074 688 aaPredicted RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms