RNA–Protein interactions for RNA: ENST00000361866.7

COL6A1-201, Transcript of collagen type VI alpha 1 chain, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene COL6A1, Length 4,238 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-201ENST00000361866 MYO1AQ9UBC5 1043 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 BAIAP2L1Q9UHR4 511 aa15.41■□□□□ 0.06
COL6A1-201ENST00000361866 TTC26A0AVF1 554 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 FTCDO95954 541 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 ABCB4P21439 1286 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 ZNF658Q5TYW1 1059 aaPredicted RBP15.4■□□□□ 0.06
COL6A1-201ENST00000361866 NLRP10Q86W26 655 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 TFR2Q9UP52 801 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 MAP3K15Q6ZN16 1313 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 ARAP3Q8WWN8 1544 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 A0A1W2PRG0 241 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 PEX26Q7Z412 305 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 MAP2K2P36507 400 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 GGCXP38435 758 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 GSTO1P78417 241 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 PDCLQ13371 301 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 REXO1L1PQ8IX06 675 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 CCDC26Q8TAB7 109 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 TMEM94Q12767 1356 aa15.4■□□□□ 0.06
COL6A1-201ENST00000361866 KLRF2D3W0D1 207 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 SAMD15Q9P1V8 674 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 MAP2P11137 1827 aaKnown RBP15.39■□□□□ 0.05
COL6A1-201ENST00000361866 PP2D1A8MPX8 630 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 HEXIM1O94992 359 aaKnown RBP15.39■□□□□ 0.05
COL6A1-201ENST00000361866 H2AFXP16104 143 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-201ENST00000361866 PRCPP42785 496 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 RABL6Q3YEC7 729 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-201ENST00000361866 LRRC45Q96CN5 670 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 CPVLQ9H3G5 476 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 PCDHB13Q9Y5F0 798 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 OVOS2A0A0J9YW53 1432 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 OVOS2Q6IE36 1432 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 CACNB1Q02641 598 aaPredicted RBP15.39■□□□□ 0.05
COL6A1-201ENST00000361866 LLGL1Q15334 1064 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 KRT25Q7Z3Z0 450 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 DNAJC5Q9H3Z4 198 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 ATG3Q9NT62 314 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP15.39■□□□□ 0.05
COL6A1-201ENST00000361866 TUBE1Q9UJT0 475 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 ADGRB2O60241 1585 aa15.39■□□□□ 0.05
COL6A1-201ENST00000361866 NMT2O60551 498 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 TBC1D8O95759 1140 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 OR52Z1P0C646 297 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 EIF4A3P38919 411 aaKnown RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 ARHGAP25P42331 645 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 RDH13Q8NBN7 331 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 NOA1Q8NC60 698 aaKnown RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 RWDD2AQ9UIY3 292 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 EPB41L3Q9Y2J2 1087 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 MYOM1P52179 1685 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 HEG1Q9ULI3 1381 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 ESYT3A0FGR9 886 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 RIMBP2O15034 1052 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 CHMP2AO43633 222 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 TFRCP02786 760 aaKnown RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 LONP1P36776 959 aaKnown RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 PPP1R2P41236 205 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 RFX5P48382 616 aaPredicted RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 HS2ST1Q7LGA3 356 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 KRT26Q7Z3Y9 468 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 SLF2Q8IX21 1173 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 MRRFQ96E11 262 aaKnown RBP15.38■□□□□ 0.05
COL6A1-201ENST00000361866 PPFIA4O75335 1185 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 RFC4P35249 363 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 PDIA6Q15084 440 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 TPTE2Q6XPS3 522 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 MAEAQ7L5Y9 396 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 HPS5Q9UPZ3 1129 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 FAM13AO94988 1023 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 CETN2P41208 172 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 P2RX5Q93086 422 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 RASAL2Q9UJF2 1139 aa15.38■□□□□ 0.05
COL6A1-201ENST00000361866 KIAA1210Q9ULL0 1709 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 EEF1GP26641 437 aaKnown RBP15.37■□□□□ 0.05
COL6A1-201ENST00000361866 RUFY4Q6ZNE9 571 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 MB21D1Q8N884 522 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 MGARPQ8TDB4 240 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 PKD2L1Q9P0L9 805 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 FRMPD2Q68DX3 1309 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-201ENST00000361866 ZC3H13Q5T200 1668 aaKnown RBP15.37■□□□□ 0.05
COL6A1-201ENST00000361866 SPDYE3A6NKU9 549 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 ATP1A1P05023 1023 aaKnown RBP15.37■□□□□ 0.05
COL6A1-201ENST00000361866 HLA-DOAP06340 250 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 FBXO2Q9UK22 296 aaPredicted RBP15.37■□□□□ 0.05
COL6A1-201ENST00000361866 UTP11Q9Y3A2 253 aaKnown RBP15.37■□□□□ 0.05
COL6A1-201ENST00000361866 GOLGA8KD6RF30 607 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 PPP1R7Q15435 360 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 PARP10Q53GL7 1025 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 ZBTB21Q9ULJ3 1066 aa15.37■□□□□ 0.05
COL6A1-201ENST00000361866 KRIT1O00522 736 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 ZNF185O15231 689 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 BUB1BO60566 1050 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 CTNNA2P26232 953 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 MRPL12P52815 198 aaKnown RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 NCAPHQ15003 741 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 MYOCDQ8IZQ8 938 aa15.36■□□□□ 0.05
COL6A1-201ENST00000361866 ZNF526Q8TF50 670 aaPredicted RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 NSRP1Q9H0G5 558 aaKnown RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 BAZ2BQ9UIF8 2168 aaKnown RBP15.36■□□□□ 0.05
COL6A1-201ENST00000361866 NNTQ13423 1086 aa15.36■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms