RNA–Protein interactions for RNA: ENST00000361368.6

SMURF1-202, Transcript of SMAD specific E3 ubiquitin protein ligase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMURF1, Length 5,581 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMURF1-202ENST00000361368 DPP9Q86TI2 863 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 ZMYM6O95789 1325 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 RNF8O76064 485 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 ERCC3P19447 782 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 MAGEF1Q9HAY2 307 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 TYW1Q9NV66 732 aaKnown RBP22.28■■□□□ 1.16
SMURF1-202ENST00000361368 KRT3P12035 628 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 PRPSAP1Q14558 356 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 KRT71Q3SY84 523 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 WDR17Q8IZU2 1322 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 TRIML1Q8N9V2 468 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 AP5M1Q9H0R1 490 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 TTLL7Q6ZT98 887 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 MAP7D3Q8IWC1 876 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 HAUS8Q9BT25 410 aa22.28■■□□□ 1.16
SMURF1-202ENST00000361368 IRX4P78413 519 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 RBBP5Q15291 538 aaKnown RBP22.27■■□□□ 1.16
SMURF1-202ENST00000361368 VCX3AQ9NNX9 186 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 TMEM232C9JQI7 657 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 PDE6AP16499 860 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 STX2P32856 288 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 LONRF3Q496Y0 759 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 ATP6V0A1Q93050 837 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 RGS16O15492 202 aaPredicted RBP22.27■■□□□ 1.16
SMURF1-202ENST00000361368 GARSP41250 739 aaKnown RBP22.27■■□□□ 1.16
SMURF1-202ENST00000361368 GYG1P46976 350 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 FAM173BQ6P4H8 233 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 LRRC47Q8N1G4 583 aaKnown RBP22.27■■□□□ 1.16
SMURF1-202ENST00000361368 STAMQ92783 540 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 TRIM56Q9BRZ2 755 aaKnown RBP22.27■■□□□ 1.16
SMURF1-202ENST00000361368 NUB1Q9Y5A7 615 aa22.27■■□□□ 1.16
SMURF1-202ENST00000361368 SOS2Q07890 1332 aaPredicted RBP22.26■■□□□ 1.15
SMURF1-202ENST00000361368 A0A1B0GUA9 196 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 LRRIQ4A6NIV6 560 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 PHKG2P15735 406 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 LMNB1P20700 586 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 INPP5BP32019 993 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 ADCY8P40145 1251 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 SCNN1DP51172 638 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 MORC3Q14149 939 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 TNKSO95271 1327 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 U2AF2P26368 475 aaKnown RBP eCLIP22.26■■□□□ 1.15
SMURF1-202ENST00000361368 DOK7Q18PE1 504 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 SAR1BQ9Y6B6 198 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 SESTD1Q86VW0 696 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 RETREG2Q8NC44 543 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 GADD45GIP1Q8TAE8 222 aaPredicted RBP22.26■■□□□ 1.15
SMURF1-202ENST00000361368 ABCB4P21439 1286 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 ABCD1P33897 745 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 PNOCQ13519 176 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 SUPT20HL1Q3ZLR7 823 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 HVCN1Q96D96 273 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 ADD3Q9UEY8 706 aaKnown RBP22.26■■□□□ 1.15
SMURF1-202ENST00000361368 LEMD3Q9Y2U8 911 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 XDHP47989 1333 aa22.26■■□□□ 1.15
SMURF1-202ENST00000361368 ARHGEF37A1IGU5 675 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 XPAP23025 273 aaPredicted RBP22.25■■□□□ 1.15
SMURF1-202ENST00000361368 PSMB7Q99436 277 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 NDUFB9Q9Y6M9 179 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 A6NJR5 290 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 ARHGAP4P98171 946 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 NAA25Q14CX7 972 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 GPATCH4Q5T3I0 446 aaKnown RBP22.25■■□□□ 1.15
SMURF1-202ENST00000361368 METTL23Q86XA0 190 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 AMNQ9BXJ7 453 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 HYOU1Q9Y4L1 999 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 GTPBP6O43824 516 aaPredicted RBP22.25■■□□□ 1.15
SMURF1-202ENST00000361368 TRMT44Q8IYL2 757 aaKnown RBP22.25■■□□□ 1.15
SMURF1-202ENST00000361368 PRKAG2Q9UGJ0 569 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 MED23Q9ULK4 1368 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 PLEKHG3A1L390 1219 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 JAK2O60674 1132 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 S100BP04271 92 aaPredicted RBP22.25■■□□□ 1.15
SMURF1-202ENST00000361368 WHAMMP3Q1A5X7 153 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 NME8Q8N427 588 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 POLA2Q14181 598 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 ZNF449Q6P9G9 518 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 HOMER3Q9NSC5 361 aa22.25■■□□□ 1.15
SMURF1-202ENST00000361368 LONP1P36776 959 aaKnown RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 CHRNDQ07001 517 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 IFRD2Q12894 506 aaPredicted RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 CDKL2Q92772 493 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 TRPC5Q9UL62 973 aaPredicted RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 SSH2Q76I76 1423 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 GSTA1P08263 222 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 GSTA2P09210 222 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 NSFP46459 744 aaKnown RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 RUNDC3BQ96NL0 473 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 SEPT10Q9P0V9 454 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 DDX41Q9UJV9 622 aaKnown RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 LRFN2Q9ULH4 789 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 ZNF804BA4D1E1 1349 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 KRT10P13645 584 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 THRAP3Q9Y2W1 955 aaKnown RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 DLATP10515 647 aaKnown RBP22.24■■□□□ 1.15
SMURF1-202ENST00000361368 ANAPC5Q9UJX4 755 aa22.24■■□□□ 1.15
SMURF1-202ENST00000361368 EIF3CLB5ME19 914 aaKnown RBP22.23■■□□□ 1.15
SMURF1-202ENST00000361368 KRIT1O00522 736 aa22.23■■□□□ 1.15
SMURF1-202ENST00000361368 PPEF1O14829 653 aaPredicted RBP22.23■■□□□ 1.15
SMURF1-202ENST00000361368 PIK3CAP42336 1068 aa22.23■■□□□ 1.15
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms