RNA–Protein interactions for RNA: ENST00000361337.2

TOP1-201, Transcript of DNA topoisomerase I, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TOP1, Length 3,738 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP1-201ENST00000361337 ADD2P35612 726 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 ERVK-24P63145 666 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 BRD3Q15059 726 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 AOC3Q16853 763 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 IFIT1BQ5T764 474 aaKnown RBP10.22□□□□□ -0.77
TOP1-201ENST00000361337 MLKLQ8NB16 471 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 CSF1RP07333 972 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 ALDH1B1P30837 517 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 UBE4AQ14139 1066 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 NAA25Q14CX7 972 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 CTR9Q6PD62 1173 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 SLC44A5Q8NCS7 719 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.22□□□□□ -0.77
TOP1-201ENST00000361337 EPB41L4AQ9HCS5 686 aaPredicted RBP10.22□□□□□ -0.77
TOP1-201ENST00000361337 MMP1P03956 469 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 PLCD1P51178 756 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 CTCFLQ8NI51 663 aaPredicted RBP10.22□□□□□ -0.77
TOP1-201ENST00000361337 CRACR2AQ9BSW2 395 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 ZNF408Q9H9D4 720 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 CABP5Q9NP86 173 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 RAB21Q9UL25 225 aa10.22□□□□□ -0.77
TOP1-201ENST00000361337 KIF5CO60282 957 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 CDKL5O76039 1030 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 NF2P35240 595 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 PBX1P40424 430 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 MECOMQ03112 1051 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 SSRP1Q08945 709 aaKnown RBP10.21□□□□□ -0.77
TOP1-201ENST00000361337 CASP8Q14790 479 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 PCMTD1Q96MG8 357 aaPredicted RBP10.21□□□□□ -0.77
TOP1-201ENST00000361337 USP40Q9NVE5 1235 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 HDAC6Q9UBN7 1215 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 ADD3Q9UEY8 706 aaKnown RBP10.21□□□□□ -0.77
TOP1-201ENST00000361337 ABCC12Q96J65 1359 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 KCPQ6ZWJ8 1503 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 XDHP47989 1333 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 MFAP3LO75121 409 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 GOLGA8HP0CJ92 632 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 DDR1Q08345 913 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 HDXQ7Z353 690 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 RPAINQ86UA6 219 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 MSANTD4Q8NCY6 345 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 RIN2Q8WYP3 895 aaPredicted RBP10.21□□□□□ -0.77
TOP1-201ENST00000361337 ESR2Q92731 530 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 SCLT1Q96NL6 688 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 PANX2Q96RD6 677 aa10.21□□□□□ -0.77
TOP1-201ENST00000361337 TAF1LQ8IZX4 1826 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 TNS2Q63HR2 1409 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 ENC1O14682 589 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 ZEB2O60315 1214 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 ZMYND10O75800 440 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 ARHGAP25P42331 645 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 BTDP43251 543 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 NAP1L1P55209 391 aaKnown RBP10.21□□□□□ -0.78
TOP1-201ENST00000361337 SLC15A2Q16348 729 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 PPFIBP1Q86W92 1011 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 PSD3Q9NYI0 1048 aa10.21□□□□□ -0.78
TOP1-201ENST00000361337 MYO1BO43795 1136 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 FMNL1O95466 1100 aaPredicted RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 MATR3P43243 847 aaKnown RBP eCLIP10.2□□□□□ -0.788e-7■■■□□ 17.8
TOP1-201ENST00000361337 CUL4BQ13620 913 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SLC27A3Q5K4L6 730 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 WDR78Q5VTH9 848 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 TTC19Q6DKK2 380 aaPredicted RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 RASGRP2Q7LDG7 609 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SPATA20Q8TB22 786 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 CPVLQ9H3G5 476 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 KAT14Q9H8E8 782 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 CLEC11AQ9Y240 323 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 WDR19Q8NEZ3 1342 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SARNPP82979 210 aaKnown RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 TFAP4Q01664 338 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 CATIPQ7Z7H3 387 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 WDR66Q8TBY9 1149 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 HNRNPLLQ8WVV9 542 aaKnown RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 EYA3Q99504 573 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SLF1Q9BQI6 1058 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 RNF41Q9H4P4 317 aaPredicted RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 UTRNP46939 3433 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SYNRGQ9UMZ2 1314 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SHTN1A0MZ66 631 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 CTAGE9A4FU28 777 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SRGAP2O75044 1071 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 SLURP2P0DP57 97 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 GBP2P32456 591 aaPredicted RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 GSPT2Q8IYD1 628 aaKnown RBP10.2□□□□□ -0.78
TOP1-201ENST00000361337 BLZF1Q9H2G9 400 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 CD209Q9NNX6 404 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 DLEC1Q9Y238 1755 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 RIC1Q4ADV7 1423 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 MYH3P11055 1940 aa10.2□□□□□ -0.78
TOP1-201ENST00000361337 IVLP07476 585 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 NOP2P46087 812 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 GPR162Q16538 588 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 LRRC31Q6UY01 552 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 SGMS1Q86VZ5 419 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 PROM2Q8N271 834 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 FLAD1Q8NFF5 587 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 STRBPQ96SI9 672 aaKnown RBP10.19□□□□□ -0.78
TOP1-201ENST00000361337 CHP1Q99653 195 aa10.19□□□□□ -0.78
TOP1-201ENST00000361337 VPS16Q9H269 839 aa10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms