RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 CFAP65Q6ZU64 1925 aaKnown RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 HMGB1P1B2RPK0 211 aaPredicted RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 KCNA6P17658 529 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 E4F1Q66K89 784 aaPredicted RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 CCDC13Q8IYE1 715 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 DHTKD1Q96HY7 919 aaPredicted RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 THAP9Q9H5L6 903 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 SH2B2O14492 632 aaPredicted RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 IL2RBP14784 551 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 ZNF496Q96IT1 587 aaPredicted RBP15.36■□□□□ 0.05
SMC5-201ENST00000361138 PCDHA13Q9Y5I0 950 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 STK24Q9Y6E0 443 aa15.36■□□□□ 0.05
SMC5-201ENST00000361138 NOL3O60936 208 aaKnown RBP15.35■□□□□ 0.05
SMC5-201ENST00000361138 PDE6AP16499 860 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 KRT15P19012 456 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 KCNJ6P48051 423 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 ST5P78524 1137 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 CFAP157Q5JU67 520 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 EMBQ6PCB8 327 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 WHAMMQ8TF30 809 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 MAGEF1Q9HAY2 307 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 SEMA3EO15041 775 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 DDAH1O94760 285 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 SUN1O94901 812 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 APBB1IPQ7Z5R6 666 aaPredicted RBP15.35■□□□□ 0.05
SMC5-201ENST00000361138 ANKRD2Q9GZV1 360 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 CNOT10Q9H9A5 744 aaKnown RBP15.35■□□□□ 0.05
SMC5-201ENST00000361138 INTS9Q9NV88 658 aaKnown RBP15.35■□□□□ 0.05
SMC5-201ENST00000361138 TNKSO95271 1327 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 LMTK3Q96Q04 1460 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 LRRC7Q96NW7 1537 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 LRRD1A4D1F6 860 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 SCG2P13521 617 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 TECP42680 631 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 MAIP1Q8WWC4 291 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 SLC39A2Q9NP94 309 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 GPCPD1Q9NPB8 672 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 IGSF1Q8N6C5 1336 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 SASH1O94885 1247 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 KRT31Q15323 416 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 FAM47AQ5JRC9 791 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 CCDC110Q8TBZ0 833 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 STAG1Q8WVM7 1258 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 TCP11Q8WWU5 503 aa15.35■□□□□ 0.05
SMC5-201ENST00000361138 A1BGP04217 495 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 ABHD10Q9NUJ1 306 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 AATFQ9NY61 560 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMC5-201ENST00000361138 ANAPC4Q9UJX5 808 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 IQCB1Q15051 598 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 CIAO1O76071 339 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 TBC1D8O95759 1140 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 BCRP11274 1271 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 SEPT6Q14141 434 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 MB21D1Q8N884 522 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 IMPG2Q9BZV3 1241 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 TRIM4Q9C037 500 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 SPHKAPQ2M3C7 1700 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 TROVE2P10155 538 aaKnown RBP eCLIP15.34■□□□□ 0.05
SMC5-201ENST00000361138 P2RX5Q93086 422 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 NLRP3Q96P20 1036 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 SMIM24O75264 130 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 GUCY2CP25092 1073 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 RBBP5Q15291 538 aaKnown RBP15.34■□□□□ 0.05
SMC5-201ENST00000361138 JAG2Q9Y219 1238 aa15.34■□□□□ 0.05
SMC5-201ENST00000361138 PRDM4Q9UKN5 801 aa15.33■□□□□ 0.05
SMC5-201ENST00000361138 SRGAP2O75044 1071 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 OR52Z1P0C646 297 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 LIN9Q5TKA1 542 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 AGTPBP1Q9UPW5 1226 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 GCNT3O95395 438 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 ZBED6P86452 979 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 PDCLQ13371 301 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 UBE3CQ15386 1083 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 INF2Q27J81 1249 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 FAM133BQ5BKY9 247 aaKnown RBP15.33■□□□□ 0.04
SMC5-201ENST00000361138 MRPL44Q9H9J2 332 aaKnown RBP15.33■□□□□ 0.04
SMC5-201ENST00000361138 KDM3AQ9Y4C1 1321 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 ABCB4P21439 1286 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 PPP2R5AQ15172 486 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 WDR24Q96S15 920 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 PANK4Q9NVE7 773 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 BIN2Q9UBW5 565 aaPredicted RBP15.33■□□□□ 0.04
SMC5-201ENST00000361138 PCDHB6Q9Y5E3 794 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 CHUKO15111 745 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 XRCC5P13010 732 aaKnown RBP15.33■□□□□ 0.04
SMC5-201ENST00000361138 NT5C3AQ9H0P0 336 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 DNM3Q9UQ16 869 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
SMC5-201ENST00000361138 NDC80O14777 642 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 STAT1P42224 750 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
SMC5-201ENST00000361138 CUEDC2Q9H467 287 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 NLRP1Q9C000 1473 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 KIF3CO14782 793 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 TRAPPC10P48553 1259 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 GSPT2Q8IYD1 628 aaKnown RBP15.32■□□□□ 0.04
SMC5-201ENST00000361138 SMCO2A6NFE2 343 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 I3L4J1 428 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 NYAP1Q6ZVC0 841 aa15.32■□□□□ 0.04
SMC5-201ENST00000361138 UHMK1Q8TAS1 419 aaKnown RBP15.32■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 12 ms