RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 LRP5O75197 1615 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 TTI2Q6NXR4 508 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 KRT26Q7Z3Y9 468 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 DZIP3Q86Y13 1208 aaKnown RBP12.19□□□□□ -0.46
RPE-202ENST00000359429 ZNF384Q8TF68 577 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 TRIM47Q96LD4 638 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 DUSP9Q99956 384 aaKnown RBP12.19□□□□□ -0.46
RPE-202ENST00000359429 DMGDHQ9UI17 866 aaKnown RBP12.19□□□□□ -0.46
RPE-202ENST00000359429 SHANK3Q9BYB0 1731 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 KRT86O43790 486 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 SHOX2O60902 331 aaPredicted RBP12.19□□□□□ -0.46
RPE-202ENST00000359429 PLEKP08567 350 aaPredicted RBP12.19□□□□□ -0.46
RPE-202ENST00000359429 SRGNP10124 158 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 SCG2P13521 617 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 IDEP14735 1019 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 KRT83P78385 493 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 PDE4CQ08493 712 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 FAM47AQ5JRC9 791 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 CAGE1Q8TC20 777 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 CRACR2AQ9BSW2 395 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 JADE2Q9NQC1 790 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 DISC1Q9NRI5 854 aa12.19□□□□□ -0.46
RPE-202ENST00000359429 STRCQ7RTU9 1775 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 MCM3P25205 808 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 EEF1GP26641 437 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 TSR1Q2NL82 804 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 DNAJC21Q5F1R6 531 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 ZNF662Q6ZS27 426 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 IQCA1Q86XH1 822 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 CREG2Q8IUH2 290 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 AENQ8WTP8 325 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 PURBQ96QR8 312 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 TUBGCP2Q9BSJ2 902 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 TMEM60Q9H2L4 133 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 SMARCAL1Q9NZC9 954 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 BAZ2BQ9UIF8 2168 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 MYH6P13533 1939 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 EXOC5O00471 708 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 TRIM21P19474 475 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 GYG1P46976 350 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 TRAPPC10P48553 1259 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 IRAK1P51617 712 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 EIF5P55010 431 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 CHRNDQ07001 517 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 CKAP4Q07065 602 aaKnown RBP12.18□□□□□ -0.46
RPE-202ENST00000359429 ICE2Q659A1 982 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 GPIHBP1Q8IV16 184 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 GPKOWQ92917 476 aaPredicted RBP eCLIP12.18□□□□□ -0.46
RPE-202ENST00000359429 LRRC1Q9BTT6 524 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 THAP9Q9H5L6 903 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 CAPN6Q9Y6Q1 641 aa12.18□□□□□ -0.46
RPE-202ENST00000359429 USP17L12C9JPN9 530 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 USP17L21D6R901 530 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 LONP1P36776 959 aaKnown RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 CCT5P48643 541 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 DNM2P50570 870 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 PFKFB3Q16875 520 aaPredicted RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 TYW1BQ6NUM6 668 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 FAM76AQ8TAV0 307 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 PPM1EQ8WY54 764 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 RPGRIP1Q96KN7 1286 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 EHD2Q9NZN4 543 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 LRWD1Q9UFC0 647 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 JRKLQ9Y4A0 524 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 GOLGA6CA6NDK9 693 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 GOLGA6BA6NDN3 693 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 DDAH1O94760 285 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 FGRP09769 529 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 GOLGA6DP0CG33 693 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 CYLC1P35663 651 aaPredicted RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 SLC7A5Q01650 507 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 TBC1D8BQ0IIM8 1120 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 ARL6IP4Q66PJ3 421 aaKnown RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 TTC19Q6DKK2 380 aaPredicted RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
RPE-202ENST00000359429 GIMAP8Q8ND71 665 aaPredicted RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 DRC1Q96MC2 740 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 PYM1Q9BRP8 204 aaKnown RBP12.17□□□□□ -0.46
RPE-202ENST00000359429 MLXIPQ9HAP2 919 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 EXOC1Q9NV70 894 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 GOLGA6AQ9NYA3 693 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 DUOX1Q9NRD9 1551 aa12.17□□□□□ -0.46
RPE-202ENST00000359429 COL1A1P02452 1464 aaPredicted RBP12.16□□□□□ -0.46
RPE-202ENST00000359429 STRCP1A6NGW2 1772 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 ARAP2Q8WZ64 1704 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 CALM1P0DP23 149 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 CALM2P0DP24 149 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 CALM3P0DP25 149 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 MIIPQ5JXC2 388 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 CSGALNACT2Q8N6G5 542 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 PSMB7Q99436 277 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 FAM184BQ9ULE4 1060 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 MYH3P11055 1940 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 GRIN2DO15399 1336 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 MYH2Q9UKX2 1941 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 ANO9A1A5B4 782 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 ERVV-1B6SEH8 477 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 RHOBTB3O94955 611 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 CXCR5P32302 372 aa12.16□□□□□ -0.46
RPE-202ENST00000359429 ZBED6P86452 979 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 14.3 ms