RNA–Protein interactions for RNA: ENST00000358771.4

SIRPA-202, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,996 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-202ENST00000358771 CERS3Q8IU89 383 aa15.93■□□□□ 0.14
SIRPA-202ENST00000358771 ZNF579Q8NAF0 562 aaKnown RBP15.93■□□□□ 0.14
SIRPA-202ENST00000358771 ACRBPQ8NEB7 543 aa15.93■□□□□ 0.14
SIRPA-202ENST00000358771 ERMNQ8TAM6 284 aa15.93■□□□□ 0.14
SIRPA-202ENST00000358771 MTA3Q9BTC8 594 aa15.93■□□□□ 0.14
SIRPA-202ENST00000358771 OSBPL5Q9H0X9 879 aaPredicted RBP15.93■□□□□ 0.14
SIRPA-202ENST00000358771 TUBE1Q9UJT0 475 aa15.93■□□□□ 0.14
SIRPA-202ENST00000358771 STX10O60499 249 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 CYP26C1Q6V0L0 522 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 CYP4A11Q02928 519 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 MTF1Q14872 753 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 PRR16Q569H4 304 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 DCAF17Q5H9S7 520 aaPredicted RBP15.92■□□□□ 0.14
SIRPA-202ENST00000358771 E4F1Q66K89 784 aaPredicted RBP15.92■□□□□ 0.14
SIRPA-202ENST00000358771 MAEAQ7L5Y9 396 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 CENPHQ9H3R5 247 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 DISC1Q9NRI5 854 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 KRT86O43790 486 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 USP8P40818 1118 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 TMTC1Q8IUR5 882 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 FBXL16Q8N461 479 aa15.92■□□□□ 0.14
SIRPA-202ENST00000358771 LMO7Q8WWI1 1683 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 KIF20AO95235 890 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 KRT31Q15323 416 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 SLFN13Q68D06 897 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 CCDC174Q6PII3 467 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 TOGARAM2Q6ZUX3 1019 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 SYCP3Q8IZU3 236 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 CPXCR1Q8N123 301 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 ZFP91Q96JP5 570 aaPredicted RBP15.91■□□□□ 0.14
SIRPA-202ENST00000358771 TRERF1Q96PN7 1200 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 LRRC27Q9C0I9 530 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 POLD4Q9HCU8 107 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 CNTNAP5Q8WYK1 1306 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 POTEMA6NI47 508 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 ICA1Q05084 483 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 NCBP1Q09161 790 aaKnown RBP15.91■□□□□ 0.14
SIRPA-202ENST00000358771 KMT5BQ4FZB7 885 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 LARGE2Q8N3Y3 721 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 NEK11Q8NG66 645 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 BPIFA3Q9BQP9 254 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 IRX2Q9BZI1 471 aaPredicted RBP15.91■□□□□ 0.14
SIRPA-202ENST00000358771 LRRC37A3O60309 1634 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 JCADQ9P266 1359 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 TTLL1O95922 423 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 TUBB4AP04350 444 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 AKR1B1P15121 316 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 RCAN1P53805 252 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 GRIK5Q16478 980 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 TXNRD1Q16881 649 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 RC3H1Q5TC82 1133 aaKnown RBP15.91■□□□□ 0.14
SIRPA-202ENST00000358771 TBC1D16Q8TBP0 767 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 HPS3Q969F9 1004 aa15.91■□□□□ 0.14
SIRPA-202ENST00000358771 DDX39AO00148 427 aaKnown RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 PPP1R12BO60237 982 aaPredicted RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 PDE6BP35913 854 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 PRCPP42785 496 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 ATP2C1P98194 919 aaPredicted RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 SYCP1Q15431 976 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 ZFYVE27Q5T4F4 411 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 SLC51AQ86UW1 340 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 OR8K1Q8NGG5 319 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 DDX25Q9UHL0 483 aaKnown RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 H7C1D1 291 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 EIF3JO75822 258 aaKnown RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 CHMP4BP1P59074 171 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 UBXN2AP68543 259 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 TYW1BQ6NUM6 668 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 HPSEQ9Y251 543 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 CNTNAP4Q9C0A0 1308 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 AFDNP55196 1824 aaKnown RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 GTF2F1P35269 517 aaKnown RBP eCLIP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 KRT83P78385 493 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 SP4Q02446 784 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 PKN1Q16512 942 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 ZNF658Q5TYW1 1059 aaPredicted RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 FNBP4Q8N3X1 1017 aaPredicted RBP15.9■□□□□ 0.14
SIRPA-202ENST00000358771 ANKRD13CQ8N6S4 541 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 TUBGCP2Q9BSJ2 902 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 EPC1Q9H2F5 836 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 TMEM60Q9H2L4 133 aa15.9■□□□□ 0.14
SIRPA-202ENST00000358771 TMCO5BA8MYB1 307 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 ENC1O14682 589 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 PAFAH1B1P43034 410 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 RNASE9P60153 205 aaKnown RBP15.89■□□□□ 0.13
SIRPA-202ENST00000358771 KIFC2Q96AC6 838 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 GDAP1L1Q96MZ0 367 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 RAPGEF1Q13905 1077 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 CCDC65Q8IXS2 484 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 TAF4BQ92750 862 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 HOMER2Q9NSB8 354 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 ANAPC4Q9UJX5 808 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 HDAC9Q9UKV0 1011 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 TACC3Q9Y6A5 838 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 KDM3BQ7LBC6 1761 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L15C9J2P7 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L13C9JLJ4 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L11C9JVI0 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L18D6R9N7 530 aa15.89■□□□□ 0.13
SIRPA-202ENST00000358771 USP17L22D6RA61 530 aa15.89■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms