RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 TCERG1LQ5VWI1 586 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 CABP7Q86V35 215 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 OTUD6BQ8N6M0 293 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 PPM1EQ8WY54 764 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 EHD2Q9NZN4 543 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 NCK2O43639 380 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 ADAMTS2O95450 1211 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 CSF1RP07333 972 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 DNM2P50570 870 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 VAV2P52735 878 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 EIF6P56537 245 aaKnown RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 IRX3P78415 501 aaPredicted RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 PRPF4BQ13523 1007 aaKnown RBP7.33□□□□□ -1.24
CSDE1-203ENST00000358528 LRRC41Q15345 812 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 ANKIB1Q9P2G1 1089 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 XDHP47989 1333 aa7.33□□□□□ -1.24
CSDE1-203ENST00000358528 ESYT3A0FGR9 886 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 WTIPA6NIX2 430 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 PRPF3O43395 683 aaKnown RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 OPA1O60313 960 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 ERLIN2O94905 339 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 VEGFAP15692 232 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 SARSP49591 514 aaKnown RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 USP14P54578 494 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 RASSF7Q02833 373 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 SRBD1Q8N5C6 995 aaKnown RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 CAPS2Q9BXY5 557 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 NALCNQ8IZF0 1738 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 WDR17Q8IZU2 1322 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TRAF5O00463 557 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 INPP5BP32019 993 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 AMPD3Q01432 767 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 RAPGEF1Q13905 1077 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 KCTD19Q17RG1 926 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 SMIM5Q71RC9 77 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 NELFCDQ8IXH7 590 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 FBXL16Q8N461 479 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 DYNLL2Q96FJ2 89 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TMEM94Q12767 1356 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 BICDL2A1A5D9 508 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 USP17L8P0C7I0 530 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TNNI2P48788 182 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 PDCLQ13371 301 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 MUM1L1Q5H9M0 696 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 NFRKBQ6P4R8 1299 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 PNMA1Q8ND90 353 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TSG101Q99816 390 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 LACRTQ9GZZ8 138 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 GOPCQ9HD26 462 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 LUC7LQ9NQ29 371 aaKnown RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 FAM53CQ9NYF3 392 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 BIN2Q9UBW5 565 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 JRKLQ9Y4A0 524 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TUBGCP6Q96RT7 1819 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 PLEKP08567 350 aaPredicted RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 FCER1AP12319 257 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 CDR1P51861 262 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 ALX1Q15699 326 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 EZH2Q15910 746 aaKnown RBP7.32□□□□□ -1.24
CSDE1-203ENST00000358528 LRRC31Q6UY01 552 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TMTC3Q6ZXV5 915 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 CCDC113Q9H0I3 377 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 EHD4Q9H223 541 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 KANSL2Q9H9L4 492 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 MYO1AQ9UBC5 1043 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 TACC3Q9Y6A5 838 aa7.32□□□□□ -1.24
CSDE1-203ENST00000358528 ABCC12Q96J65 1359 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 USP17L3A6NCW0 530 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 USP17L4A6NCW7 530 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 SMIM23A6NLE4 172 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 LGALS16A8MUM7 142 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 PLCG1P19174 1290 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 EIF4A3P38919 411 aaKnown RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 GUCY2DQ02846 1103 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 EVX2Q03828 476 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 IKQ13123 557 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 USP17L1Q7RTZ2 530 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 TMC4Q7Z404 712 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 ADGRA1Q86SQ6 560 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 SH2D3CQ8N5H7 860 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 PHF20Q9BVI0 1012 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 TRIM31Q9BZY9 425 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 PPANQ9NQ55 473 aaKnown RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 DISC1Q9NRI5 854 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 BMP2KQ9NSY1 1161 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 CAPN7Q9Y6W3 813 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 LRRC37A3O60309 1634 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 PPFIA4O75335 1185 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 FTCDO95954 541 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 PMS1P54277 932 aaKnown RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 CDKAL1Q5VV42 579 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 TAX1BP1Q86VP1 789 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 STAG2Q8N3U4 1231 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 PROCA1Q8NCQ7 364 aaPredicted RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 COG1Q8WTW3 980 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 CCDC43Q96MW1 224 aaKnown RBP7.31□□□□□ -1.24
CSDE1-203ENST00000358528 LRRC1Q9BTT6 524 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 TCRBV5S4A2TA0A5A2 114 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 MAP2K7O14733 419 aa7.31□□□□□ -1.24
CSDE1-203ENST00000358528 MAGEA9P43362 315 aa7.31□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 9.4 ms