RNA–Protein interactions for RNA: ENST00000357570.9

CACNA1E-201, Transcript of calcium voltage-gated channel subunit alpha1 E, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CACNA1E, Length 7,064 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1E-201ENST00000357570 SYNE4Q8N205 404 aa11.74□□□□□ -0.53
CACNA1E-201ENST00000357570 NKIRAS1Q9NYS0 192 aa11.74□□□□□ -0.53
CACNA1E-201ENST00000357570 KDM2BQ8NHM5 1336 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 KIF21AQ7Z4S6 1674 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 HNRNPDLO14979 420 aaKnown RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 HEXIM1O94992 359 aaKnown RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 CAVIN2O95810 425 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 DAAM2Q86T65 1068 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 CTAGE3PQ8IX95 158 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PPM1KQ8N3J5 372 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 IGSF22Q8N9C0 903 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 DCTPP1Q9H773 170 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 TAB2Q9NYJ8 693 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 POLR3AO14802 1390 aaPredicted RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 A6NJR5 290 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 TFAMQ00059 246 aaKnown RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 SDCCAG8Q86SQ7 713 aaPredicted RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PGBD1Q96JS3 809 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 ITM2BQ9Y287 266 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PCDHB4Q9Y5E5 795 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 POLR2BP30876 1174 aaKnown RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 SF3A3Q12874 501 aaKnown RBP eCLIP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 NACC1Q96RE7 527 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PNMA6EA0A0J9YXQ4 647 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PFDN6O15212 129 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 TTLL1O95922 423 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 HSPA4P34932 840 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PHKA1P46020 1223 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 FAM160A1Q05DH4 1040 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 KLHL30Q0D2K2 578 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 PLEKHM2Q8IWE5 1019 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 YAF2Q8IY57 180 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 NOL12Q9UGY1 213 aaKnown RBP eCLIP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 V9GYY5 206 aaPredicted RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 RPRD2Q5VT52 1461 aaKnown RBP11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 CPLX4Q7Z7G2 160 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 CCDC105Q8IYK2 499 aa11.73□□□□□ -0.53
CACNA1E-201ENST00000357570 OPA1O60313 960 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 FBXW4P57775 412 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 ERCC6LQ2NKX8 1250 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 SLC9C1Q4G0N8 1177 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 KSR1Q8IVT5 923 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 OTUD7AQ8TE49 926 aaPredicted RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 VIMP08670 466 aaKnown RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 NXNQ6DKJ4 435 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 FAM117BQ6P1L5 589 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 EXOC8Q8IYI6 725 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 BLIDQ8IZY5 108 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 U2AF1L4Q8WU68 220 aaKnown RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 CEP170P1Q96L14 293 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 SWAP70Q9UH65 585 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 RIPOR2Q9Y4F9 1068 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 NOL3O60936 208 aaKnown RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 CAPN12Q6ZSI9 719 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 RNF139Q8WU17 664 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 FAM207AQ9NSI2 230 aaPredicted RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 TMEM2Q9UHN6 1383 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 E7EWF7 191 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 PDZD4Q76G19 769 aaPredicted RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 ADORA1P30542 326 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 HADHQ16836 314 aaKnown RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 BBS5Q8N3I7 341 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 RAB20Q9NX57 234 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 NXF1Q9UBU9 619 aaKnown RBP11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 ABCC2Q92887 1545 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 NEMP1O14524 444 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 PGBD3Q8N328 593 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 AMNQ9BXJ7 453 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 KMT5AQ9NQR1 393 aa11.72□□□□□ -0.53
CACNA1E-201ENST00000357570 SEMA3EO15041 775 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 CEP104O60308 925 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 UPP2O95045 317 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 BMP3P12645 472 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 VAV2P52735 878 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 EPHB1P54762 984 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 PRPSAP1Q14558 356 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 TTBK2Q6IQ55 1244 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 PDXDC2PQ6P474 469 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 VPS37BQ9H9H4 285 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 ARAP3Q8WWN8 1544 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 IQCA1LA6NCM1 817 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 XRCC5P13010 732 aaKnown RBP11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 PDE6AP16499 860 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 FOXD4Q12950 439 aaPredicted RBP11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 CNGA4Q8IV77 575 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 ATP6V0A1Q93050 837 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 SLC38A10Q9HBR0 1119 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 PNMA2Q9UL42 364 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 ANGPTL3Q9Y5C1 460 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 S100BP04271 92 aaPredicted RBP11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 EIF2AK2P19525 551 aaKnown RBP11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 HPDP32754 393 aaPredicted RBP11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 KLHL7Q8IXQ5 586 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 SMYD2Q9NRG4 433 aa11.71□□□□□ -0.53
CACNA1E-201ENST00000357570 H0YCG3 227 aa11.71□□□□□ -0.54
CACNA1E-201ENST00000357570 KRT40Q6A162 431 aa11.71□□□□□ -0.54
CACNA1E-201ENST00000357570 TAOK1Q7L7X3 1001 aa11.71□□□□□ -0.54
CACNA1E-201ENST00000357570 RABGAP1Q9Y3P9 1069 aa11.71□□□□□ -0.54
CACNA1E-201ENST00000357570 PDE6CP51160 858 aa11.71□□□□□ -0.54
CACNA1E-201ENST00000357570 SFMBT2Q5VUG0 894 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms