RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 KLRF2D3W0D1 207 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 GOLGA8KD6RF30 607 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 HARSP12081 509 aaKnown RBP12.94□□□□□ -0.34
COL9A1-202ENST00000357250 PSMC4P43686 418 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 RASSF2P50749 326 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 SRGAP1Q7Z6B7 1085 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 MCF2L2Q86YR7 1114 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 NELFCDQ8IXH7 590 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 BLZF1Q9H2G9 400 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 USP40Q9NVE5 1235 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 MYCLP12524 364 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-202ENST00000357250 PTPN12Q05209 780 aaKnown RBP12.94□□□□□ -0.34
COL9A1-202ENST00000357250 GPATCH4Q5T3I0 446 aaKnown RBP12.94□□□□□ -0.34
COL9A1-202ENST00000357250 CCDC125Q86Z20 511 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 LMNTD2Q8IXW0 634 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 RPAP1Q9BWH6 1393 aaPredicted RBP12.94□□□□□ -0.34
COL9A1-202ENST00000357250 HOMER3Q9NSC5 361 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 TRPC6Q9Y210 931 aa12.94□□□□□ -0.34
COL9A1-202ENST00000357250 OAS2P29728 719 aaKnown RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 SMIM5Q71RC9 77 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 MIER3Q7Z3K6 550 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 KLHL7Q8IXQ5 586 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 VPS52Q8N1B4 723 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 BBOF1Q8ND07 529 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 DDX23Q9BUQ8 820 aaKnown RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 LSM14BQ9BX40 385 aaKnown RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 LEMD3Q9Y2U8 911 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 PNPLA6Q8IY17 1366 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 RPN1P04843 607 aaKnown RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 GCFC2P16383 781 aaKnown RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 KRT71Q3SY84 523 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 FAM47AQ5JRC9 791 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 CCDC62Q6P9F0 684 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 HACE1Q8IYU2 909 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 DHTKD1Q96HY7 919 aaPredicted RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 BCAP29Q9UHQ4 241 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 LRRC7Q96NW7 1537 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 RNF40O75150 1001 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 HLFQ16534 295 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 VSIG1Q86XK7 387 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 PSMD1Q99460 953 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 BCL2L12Q9HB09 334 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 RCOR1Q9UKL0 485 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 PTPRMP28827 1452 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 BTBD18B2RXH4 712 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 FAM26FQ5R3K3 315 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 PPP1R2P3Q6NXS1 205 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 NSMFQ6X4W1 530 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 DDX55Q8NHQ9 600 aaKnown RBP eCLIP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 DDX41Q9UJV9 622 aaKnown RBP12.93□□□□□ -0.34
COL9A1-202ENST00000357250 ARHGEF40Q8TER5 1519 aa12.93□□□□□ -0.34
COL9A1-202ENST00000357250 I3L4J1 428 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 H2AFZP0C0S5 128 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 ADKP55263 362 aaKnown RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 UAP1Q16222 522 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 H2AFVQ71UI9 128 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 GPT2Q8TD30 523 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 CCT6BQ92526 530 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 RABGGTAQ92696 567 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 TYW1Q9NV66 732 aaKnown RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 KIDINS220Q9ULH0 1771 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 DAPK3O43293 454 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 ECM2O94769 699 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 SCRN1Q12765 414 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 ASPRV1Q53RT3 343 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 NIM1KQ8IY84 436 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 ATP2A3Q93084 1043 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 FAM81BQ96LP2 452 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 NLRC4Q9NPP4 1024 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 GPHNQ9NQX3 736 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 BIN2Q9UBW5 565 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 FMNL1O95466 1100 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 PPM1FP49593 454 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 LONRF2Q1L5Z9 754 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 TSNAXIP1Q2TAA8 658 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 APOA5Q6Q788 366 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 PPIL4Q8WUA2 492 aaKnown RBP eCLIP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 FANCLQ9NW38 375 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 EPN1Q9Y6I3 576 aaPredicted RBP12.92□□□□□ -0.34
COL9A1-202ENST00000357250 POLR2MP0CAP2 368 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 ABCD1P33897 745 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 TBC1D31Q96DN5 1066 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 VCX3BQ9H321 246 aa12.92□□□□□ -0.34
COL9A1-202ENST00000357250 INO80Q9ULG1 1556 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-202ENST00000357250 ANKARQ7Z5J8 1434 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 CD19P15391 556 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 SARNPP82979 210 aaKnown RBP12.91□□□□□ -0.34
COL9A1-202ENST00000357250 FBXO11Q86XK2 927 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 TPH2Q8IWU9 490 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 TRIM6Q9C030 488 aaPredicted RBP12.91□□□□□ -0.34
COL9A1-202ENST00000357250 RIC8AQ9NPQ8 531 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 NDUFA8P51970 172 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 BPIFB4P59827 614 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 CHRNDQ07001 517 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 TCP10Q12799 353 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 DCAF15Q66K64 600 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 DEPTORQ8TB45 409 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 TSC1Q92574 1164 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 STAMQ92783 540 aa12.91□□□□□ -0.34
COL9A1-202ENST00000357250 PANK4Q9NVE7 773 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 56.9 ms