RNA–Protein interactions for RNA: ENST00000356657.10

FDPS-201, Transcript of farnesyl diphosphate synthase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene FDPS, Length 1,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FDPS-201ENST00000356657 SH2B1Q9NRF2 756 aaPredicted RBP18.56■□□□□ 0.56
FDPS-201ENST00000356657 FBXO40Q9UH90 709 aa18.56■□□□□ 0.56
FDPS-201ENST00000356657 ZBTB5O15062 677 aa18.55■□□□□ 0.56
FDPS-201ENST00000356657 PFKFB2O60825 505 aa18.55■□□□□ 0.56
FDPS-201ENST00000356657 CNMDO75829 334 aa18.55■□□□□ 0.56
FDPS-201ENST00000356657 LACTBP83111 547 aaPredicted RBP18.55■□□□□ 0.56
FDPS-201ENST00000356657 TMEM132BQ14DG7 1078 aa18.55■□□□□ 0.56
FDPS-201ENST00000356657 SAMD1Q6SPF0 538 aaPredicted RBP18.55■□□□□ 0.56
FDPS-201ENST00000356657 CCAR1Q8IX12 1150 aaKnown RBP18.55■□□□□ 0.56
FDPS-201ENST00000356657 RRP36Q96EU6 259 aaKnown RBP18.55■□□□□ 0.56
FDPS-201ENST00000356657 SLKQ9H2G2 1235 aaPredicted RBP18.55■□□□□ 0.56
FDPS-201ENST00000356657 JMJD4Q9H9V9 463 aa18.55■□□□□ 0.56
FDPS-201ENST00000356657 BTBD7Q9P203 1132 aa18.55■□□□□ 0.56
FDPS-201ENST00000356657 SEC63Q9UGP8 760 aaKnown RBP18.55■□□□□ 0.56
FDPS-201ENST00000356657 hCG_1984214I3L0E3 225 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 CPLX1O14810 134 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 RXRAP19793 462 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 CDC37Q16543 378 aaPredicted RBP18.54■□□□□ 0.56
FDPS-201ENST00000356657 DHX30Q7L2E3 1194 aaKnown RBP eCLIP18.54■□□□□ 0.56
FDPS-201ENST00000356657 TEX2Q8IWB9 1127 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 ZNF713Q8N859 430 aaPredicted RBP18.54■□□□□ 0.56
FDPS-201ENST00000356657 ZNF296Q8WUU4 475 aaPredicted RBP18.54■□□□□ 0.56
FDPS-201ENST00000356657 UBA5Q9GZZ9 404 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 R3HDMLQ9H3Y0 253 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 TPCN1Q9ULQ1 816 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 ZNF236Q9UL36 1845 aa18.54■□□□□ 0.56
FDPS-201ENST00000356657 PNMA6FA0A0J9YX94 578 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 IFNAR1P17181 557 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 FCGRTP55899 365 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 PLS1Q14651 629 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 SNRNP48Q6IEG0 339 aaKnown RBP18.53■□□□□ 0.56
FDPS-201ENST00000356657 POTEEQ6S8J3 1075 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 CCDC144CPQ8IYA2 1237 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 CHST13Q8NET6 341 aa18.53■□□□□ 0.56
FDPS-201ENST00000356657 FAM217BQ9NTX9 383 aaPredicted RBP18.53■□□□□ 0.56
FDPS-201ENST00000356657 CYTH3O43739 400 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 STRNO43815 780 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 PLEKHA8P1O95397 391 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 ABRAQ8N0Z2 381 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 SRBD1Q8N5C6 995 aaKnown RBP18.52■□□□□ 0.56
FDPS-201ENST00000356657 GTF3C6Q969F1 213 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 AMNQ9BXJ7 453 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 MOV10L1Q9BXT6 1211 aaKnown RBP18.52■□□□□ 0.56
FDPS-201ENST00000356657 RNF26Q9BY78 433 aaPredicted RBP18.52■□□□□ 0.56
FDPS-201ENST00000356657 CCPG1Q9ULG6 757 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 ZNF536O15090 1300 aa18.52■□□□□ 0.56
FDPS-201ENST00000356657 RBBP6Q7Z6E9 1792 aaKnown RBP18.52■□□□□ 0.56
FDPS-201ENST00000356657 CAPN15O75808 1086 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 ABCB11O95342 1321 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 HOXD10P28358 340 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 CDC27P30260 824 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 PRMT2P55345 433 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 FUT2Q10981 343 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 QRICH1Q2TAL8 776 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 TRIM22Q8IYM9 498 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 CPXCR1Q8N123 301 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 FAM177A1Q8N128 213 aaPredicted RBP18.52■□□□□ 0.55
FDPS-201ENST00000356657 CNTNAP5Q8WYK1 1306 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 COA7Q96BR5 231 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 IVNS1ABPQ9Y6Y0 642 aa18.52■□□□□ 0.55
FDPS-201ENST00000356657 PLXNB2O15031 1838 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 ADD1P35611 737 aaKnown RBP18.51■□□□□ 0.55
FDPS-201ENST00000356657 AKAP17AQ02040 695 aaKnown RBP18.51■□□□□ 0.55
FDPS-201ENST00000356657 NTRK3Q16288 839 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 ME3Q16798 604 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 Q3C1V9 767 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 FBXO11Q86XK2 927 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 RAB11FIP4Q86YS3 637 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 SAMD3Q8N6K7 520 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 SOCS4Q8WXH5 440 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 CPVLQ9H3G5 476 aa18.51■□□□□ 0.55
FDPS-201ENST00000356657 CWC22Q9HCG8 908 aaKnown RBP18.51■□□□□ 0.55
FDPS-201ENST00000356657 RAVER2Q9HCJ3 691 aaKnown RBP18.51■□□□□ 0.55
FDPS-201ENST00000356657 DOCK3Q8IZD9 2030 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 TNPO2O14787 897 aaKnown RBP18.5■□□□□ 0.55
FDPS-201ENST00000356657 ERCC3P19447 782 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 CCT2P78371 535 aaKnown RBP18.5■□□□□ 0.55
FDPS-201ENST00000356657 SCRN1Q12765 414 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 IFFO2Q5TF58 517 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 CCDC174Q6PII3 467 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 NBPF11Q86T75 865 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 PIGSQ96S52 555 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 ACAD9Q9H845 621 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 VAT1LQ9HCJ6 419 aa18.5■□□□□ 0.55
FDPS-201ENST00000356657 PFASO15067 1338 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 STK36Q9NRP7 1315 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 PRPF3O43395 683 aaKnown RBP18.49■□□□□ 0.55
FDPS-201ENST00000356657 PSMC4P43686 418 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 SLC35G1Q2M3R5 365 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 GPR142Q7Z601 462 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 PLEKHH3Q7Z736 793 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 CTU1Q7Z7A3 348 aaKnown RBP18.49■□□□□ 0.55
FDPS-201ENST00000356657 NCAPG2Q86XI2 1143 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 HOMER1Q86YM7 354 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 RGS22Q8NE09 1264 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 LLPHQ9BRT6 129 aaKnown RBP18.49■□□□□ 0.55
FDPS-201ENST00000356657 MCOLN1Q9GZU1 580 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 PORCNQ9H237 461 aa18.49■□□□□ 0.55
FDPS-201ENST00000356657 MAP3K20Q9NYL2 800 aaKnown RBP18.49■□□□□ 0.55
FDPS-201ENST00000356657 MRPL11Q9Y3B7 192 aaKnown RBP18.49■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms