RNA–Protein interactions for RNA: ENST00000356384.4

RXRA-201, Transcript of retinoid X receptor alpha, humanhuman

TSL 5

Gene RXRA, Length 5,770 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRA-201ENST00000356384 SMCR8Q8TEV9 937 aaPredicted RBP17.6■□□□□ 0.41
RXRA-201ENST00000356384 TSC1Q92574 1164 aa17.6■□□□□ 0.41
RXRA-201ENST00000356384 COX16Q9P0S2 106 aa17.6■□□□□ 0.41
RXRA-201ENST00000356384 KDRP35968 1356 aa17.6■□□□□ 0.41
RXRA-201ENST00000356384 LIG3P49916 1009 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 BFSP1Q12934 665 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 ARHGEF16Q5VV41 709 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 MRPL46Q9H2W6 279 aaKnown RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 ARMCX3Q9UH62 379 aaPredicted RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 FAF1Q9UNN5 650 aaPredicted RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 NPATQ14207 1427 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 MYSM1Q5VVJ2 828 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 PDZD4Q76G19 769 aaPredicted RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 BCAS4Q8TDM0 211 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 IP6K1Q92551 441 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 ZNF277Q9NRM2 450 aaPredicted RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 PPP2R2CQ9Y2T4 447 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 A1BGP04217 495 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 DLATP10515 647 aaKnown RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 ZBTB8OSQ8IWT0 167 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 ATP8A2Q9NTI2 1148 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 PANK4Q9NVE7 773 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 RNF168Q8IYW5 571 aaPredicted RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 CHMP6Q96FZ7 201 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 LRGUKQ96M69 825 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 SMYD2Q9NRG4 433 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 KIAA1468Q9P260 1216 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 H0YIN7 160 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 XKR9Q5GH70 373 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 SESTD1Q86VW0 696 aa17.59■□□□□ 0.41
RXRA-201ENST00000356384 TYW1Q9NV66 732 aaKnown RBP17.59■□□□□ 0.41
RXRA-201ENST00000356384 FRMPD2Q68DX3 1309 aaPredicted RBP17.58■□□□□ 0.41
RXRA-201ENST00000356384 PNMA6EA0A0J9YXQ4 647 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 ECE1P42892 770 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 ADALQ6DHV7 355 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 TTC19Q6DKK2 380 aaPredicted RBP17.58■□□□□ 0.41
RXRA-201ENST00000356384 ZNF654Q8IZM8 581 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 LRRC8CQ8TDW0 803 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 PAGR1Q9BTK6 254 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 ZNF148Q9UQR1 794 aa17.58■□□□□ 0.41
RXRA-201ENST00000356384 PPP2R5EQ16537 467 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 NAA35Q5VZE5 725 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 BZW2Q9Y6E2 419 aaKnown RBP17.58■□□□□ 0.4
RXRA-201ENST00000356384 ADGRL2O95490 1459 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 ABCA8O94911 1581 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 ZNF827Q17R98 1081 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 GNPTABQ3T906 1256 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 PPM1KQ8N3J5 372 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 MCUQ8NE86 351 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 HESX1Q9UBX0 185 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 PARD3Q8TEW0 1356 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.58■□□□□ 0.4
RXRA-201ENST00000356384 PHEXP78562 749 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 BEGAINQ9BUH8 593 aa17.58■□□□□ 0.4
RXRA-201ENST00000356384 PFDN6O15212 129 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 YWHAGP61981 247 aaKnown RBP eCLIP17.57■□□□□ 0.4
RXRA-201ENST00000356384 EP400NLQ6ZTU2 488 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 ZNF710Q8N1W2 664 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 MROH5Q6ZUA9 1318 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 SART1O43290 800 aaKnown RBP17.57■□□□□ 0.4
RXRA-201ENST00000356384 GPC4O75487 556 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 GARSP41250 739 aaKnown RBP17.57■□□□□ 0.4
RXRA-201ENST00000356384 DLGAP5Q15398 846 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 ME3Q16798 604 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 XPO5Q9HAV4 1204 aaKnown RBP eCLIP17.57■□□□□ 0.48e-8■■■■■ 29.6
RXRA-201ENST00000356384 USP40Q9NVE5 1235 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 ASPHQ12797 758 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 RASIP1Q5U651 963 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 BLIDQ8IZY5 108 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 TMEM63CQ9P1W3 806 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 PPP1R9AQ9ULJ8 1098 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 CCDC127Q96BQ5 260 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 PSTPIP2Q9H939 334 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 MAP3K19Q56UN5 1328 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 YTHDC2Q9H6S0 1430 aaKnown RBP17.57■□□□□ 0.4
RXRA-201ENST00000356384 PCDHA12Q9UN75 941 aa17.57■□□□□ 0.4
RXRA-201ENST00000356384 H7C0C1 242 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 N4BP1O75113 896 aaKnown RBP17.56■□□□□ 0.4
RXRA-201ENST00000356384 ALAS1P13196 640 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 ATP5OP48047 213 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 NOP9Q86U38 636 aaKnown RBP17.56■□□□□ 0.4
RXRA-201ENST00000356384 CHURC1Q8WUH1 139 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 USP19O94966 1318 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 POC1B-GALNT4F8VUJ3 575 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 TTC4O95801 387 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 PEX19P40855 299 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 TTBK2Q6IQ55 1244 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 DSCC1Q9BVC3 393 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 SUGCTQ9HAC7 445 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 ARPP21Q9UBL0 812 aaPredicted RBP17.56■□□□□ 0.4
RXRA-201ENST00000356384 MAST1Q9Y2H9 1570 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 NR1I2O75469 434 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 NOSTRINQ8IVI9 506 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 PTPN22Q9Y2R2 807 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 TCP1P17987 556 aaKnown RBP17.56■□□□□ 0.4
RXRA-201ENST00000356384 SLC39A2Q9NP94 309 aa17.56■□□□□ 0.4
RXRA-201ENST00000356384 FAM178BQ8IXR5 827 aa17.55■□□□□ 0.4
RXRA-201ENST00000356384 NLRP7Q8WX94 980 aa17.55■□□□□ 0.4
RXRA-201ENST00000356384 ORAI2Q96SN7 254 aa17.55■□□□□ 0.4
RXRA-201ENST00000356384 THRAP3Q9Y2W1 955 aaKnown RBP17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms