RNA–Protein interactions for RNA: ENST00000356147.3

PTPRA-203, Transcript of protein tyrosine phosphatase, receptor type A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPRA, Length 3,135 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRA-203ENST00000356147 CCDC178Q5BJE1 867 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 CSGALNACT2Q8N6G5 542 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 PPM1EQ8WY54 764 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 TUBGCP2Q9BSJ2 902 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 MAGEC2Q9UBF1 373 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 TNS3Q68CZ2 1445 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 ZSCAN5CA6NGD5 496 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 ZEB2O60315 1214 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 IBSPP21815 317 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 AARSP49588 968 aaKnown RBP eCLIP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 PDCLQ13371 301 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 TADA2BQ86TJ2 420 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 TSEN2Q8NCE0 465 aaKnown RBP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 CPVLQ9H3G5 476 aa11.34□□□□□ -0.59
PTPRA-203ENST00000356147 FAM207AQ9NSI2 230 aaPredicted RBP11.34□□□□□ -0.59
PTPRA-203ENST00000356147 WDR17Q8IZU2 1322 aa11.33□□□□□ -0.59
PTPRA-203ENST00000356147 EPHB6O15197 1021 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 FCER1AP12319 257 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 MTIF2P46199 727 aaKnown RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 EVA1CP58658 441 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 NAALADL2Q58DX5 795 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 PAPD7Q5XG87 772 aaKnown RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 TMC4Q7Z404 712 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 DZIP3Q86Y13 1208 aaKnown RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 ADSSL1Q8N142 457 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 CTCFLQ8NI51 663 aaPredicted RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 MS4A14Q96JA4 679 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 CAPN11Q9UMQ6 739 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 FAM169AQ9Y6X4 670 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 MYH2Q9UKX2 1941 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 TRPM3Q9HCF6 1732 aaPredicted RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 BUB1O43683 1085 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 ENOX2Q16206 610 aaKnown RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 SUSD4Q5VX71 490 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 TMTC3Q6ZXV5 915 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 IQCA1Q86XH1 822 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 ZNF507Q8TCN5 953 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 CNTNAP5Q8WYK1 1306 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 H7C1D1 291 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 KRT14P02533 472 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 KIF5AQ12840 1032 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 TRIM14Q14142 442 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 PTPROQ16827 1216 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 C2CD5Q86YS7 1000 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 ANKRD18AQ8IVF6 992 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 DNAJC7Q99615 494 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 FAM107BQ9H098 131 aa11.33□□□□□ -0.6
PTPRA-203ENST00000356147 ZNHIT6Q9NWK9 470 aaKnown RBP11.33□□□□□ -0.6
PTPRA-203ENST00000356147 RTL9Q8NET4 1388 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 LOC102724159A0A0B4J2E5 919 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 FAM170AA1A519 330 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 CYLC1P35663 651 aaPredicted RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 KRT83P78385 493 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 PWP2Q15269 919 aaKnown RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 INF2Q27J81 1249 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 SECISBP2LQ93073 1101 aaKnown RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 CCDC42Q96M95 316 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 CAPS2Q9BXY5 557 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 VIPAS39Q9H9C1 493 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 MYH6P13533 1939 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 LRP6O75581 1613 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 MYH10P35580 1976 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 EBAG9O00559 213 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 SCG2P13521 617 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 GNAT2P19087 354 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 UBA7P41226 1012 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 NAP1L1P55209 391 aaKnown RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 APBA1Q02410 837 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 STK4Q13043 487 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 ANKRD40Q6AI12 368 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 CREG2Q8IUH2 290 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 STAG2Q8N3U4 1231 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 MSL3Q8N5Y2 521 aaKnown RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 CCDC155Q8N6L0 562 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 PROCA1Q8NCQ7 364 aaPredicted RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 CNOT6LQ96LI5 555 aaKnown RBP11.32□□□□□ -0.6
PTPRA-203ENST00000356147 DISC1Q9NRI5 854 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 EXOC1Q9NV70 894 aa11.32□□□□□ -0.6
PTPRA-203ENST00000356147 MROH5Q6ZUA9 1318 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 MYH13Q9UKX3 1938 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 ERLIN2O94905 339 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 TUBB4BP68371 445 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 CKAP4Q07065 602 aaKnown RBP11.31□□□□□ -0.6
PTPRA-203ENST00000356147 CT47A1Q5JQC4 288 aaPredicted RBP11.31□□□□□ -0.6
PTPRA-203ENST00000356147 DUSP9Q99956 384 aaKnown RBP11.31□□□□□ -0.6
PTPRA-203ENST00000356147 NOC4LQ9BVI4 516 aaKnown RBP11.31□□□□□ -0.6
PTPRA-203ENST00000356147 SALL4Q9UJQ4 1053 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 LMTK3Q96Q04 1460 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 TUBBP07437 444 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 GUCY2FP51841 1108 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 CHRNDQ07001 517 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 TRADDQ15628 312 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 TTI2Q6NXR4 508 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 EFCAB13Q8IY85 973 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 SPATA4Q8NEY3 305 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 IFT81Q8WYA0 676 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 UIMC1Q96RL1 719 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 DEF6Q9H4E7 631 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 MMRN2Q9H8L6 949 aa11.31□□□□□ -0.6
PTPRA-203ENST00000356147 RMND1Q9NWS8 449 aa11.31□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms