RNA–Protein interactions for RNA: ENST00000356025.7

SIRPA-201, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 3,867 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-201ENST00000356025 TRIML1Q8N9V2 468 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 ZNF384Q8TF68 577 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 UTP3Q9NQZ2 479 aaKnown RBP eCLIP13.62□□□□□ -0.23
SIRPA-201ENST00000356025 BMP2KQ9NSY1 1161 aaPredicted RBP13.62□□□□□ -0.23
SIRPA-201ENST00000356025 SEPT11Q9NVA2 429 aaKnown RBP13.62□□□□□ -0.23
SIRPA-201ENST00000356025 NARFQ9UHQ1 456 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 CNTNAP5Q8WYK1 1306 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 TNS2Q63HR2 1409 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 TRAF5O00463 557 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 ABL1P00519 1130 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 GNA11P29992 359 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 PLS1Q14651 629 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 CLEC4GQ6UXB4 293 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 FBXL16Q8N461 479 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 MRC1P22897 1456 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 ERLIN1O75477 346 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 CALCRLQ16602 461 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 C2CD5Q86YS7 1000 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 SUGCTQ9HAC7 445 aa13.62□□□□□ -0.23
SIRPA-201ENST00000356025 XDHP47989 1333 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 CXCR5P32302 372 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 KRT79Q5XKE5 535 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 CYP26C1Q6V0L0 522 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 NAPGQ99747 312 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-201ENST00000356025 DBNDD1Q9H9R9 158 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 USP40Q9NVE5 1235 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 TRIM37O94972 964 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 PNMA6AP0CW24 399 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-201ENST00000356025 GPSM2P81274 684 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 SV2BQ7L1I2 683 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 FBXO33Q7Z6M2 555 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 SPICE1Q8N0Z3 855 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 SHISA4Q96DD7 197 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 CALCOCO1Q9P1Z2 691 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 EPN1Q9Y6I3 576 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-201ENST00000356025 MFAP3LO75121 409 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 RPS6KA4O75676 772 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 SERPINB2P05120 415 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 OR52Z1P0C646 297 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 ATP2C1P98194 919 aaPredicted RBP13.61□□□□□ -0.23
SIRPA-201ENST00000356025 SF3B3Q15393 1217 aaKnown RBP13.61□□□□□ -0.23
SIRPA-201ENST00000356025 TUBGCP2Q9BSJ2 902 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 DISC1Q9NRI5 854 aa13.61□□□□□ -0.23
SIRPA-201ENST00000356025 MARF1Q9Y4F3 1742 aaKnown RBP13.6□□□□□ -0.23
SIRPA-201ENST00000356025 CHMP2AO43633 222 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 AMPD3Q01432 767 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 NR1I3Q14994 352 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 KCTD19Q17RG1 926 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-201ENST00000356025 TCP11X2Q5H9J9 407 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 ADGRG1Q9Y653 693 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 MORC2Q9Y6X9 1032 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-201ENST00000356025 TTC26A0AVF1 554 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 MDM2Q00987 491 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-201ENST00000356025 C12orf60Q5U649 245 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 TTBK2Q6IQ55 1244 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 CCDC70Q6NSX1 233 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 AMIGO3Q86WK7 504 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 POTEDQ86YR6 584 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 C10orf67Q8IYJ2 551 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 IL17RBQ9NRM6 502 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 PPP1R3GB7ZBB8 358 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 RRAGAQ7L523 313 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 KRT26Q7Z3Y9 468 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 NEK8Q86SG6 692 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 TMTC1Q8IUR5 882 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 ZNF579Q8NAF0 562 aaKnown RBP13.6□□□□□ -0.23
SIRPA-201ENST00000356025 OR8K1Q8NGG5 319 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 SMCR8Q8TEV9 937 aaPredicted RBP13.6□□□□□ -0.23
SIRPA-201ENST00000356025 CD209Q9NNX6 404 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 PARP3Q9Y6F1 533 aa13.6□□□□□ -0.23
SIRPA-201ENST00000356025 TDP2O95551 362 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 PMS1P54277 932 aaKnown RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 SMC1AQ14683 1233 aaKnown RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 TAF3Q5VWG9 929 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 MAEAQ7L5Y9 396 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 TICAM2Q86XR7 235 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 CNOT6LQ96LI5 555 aaKnown RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 MED15Q96RN5 788 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 EFCAB8A8MWE9 144 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 BUB1O43683 1085 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 GYPCP04921 128 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 ZNF658Q5TYW1 1059 aaPredicted RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 JAKMIP2Q96AA8 810 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 ADD3Q9UEY8 706 aaKnown RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 KCPQ6ZWJ8 1503 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 MEIS1O00470 390 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 HNRNPH2P55795 449 aaKnown RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 UBXN2AP68543 259 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 CYP4A11Q02928 519 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 KIF5AQ12840 1032 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 GSPT2Q8IYD1 628 aaKnown RBP13.59□□□□□ -0.23
SIRPA-201ENST00000356025 PCDHA6Q9UN73 950 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 PCDHA8Q9Y5H6 950 aa13.59□□□□□ -0.23
SIRPA-201ENST00000356025 TRIM65Q6PJ69 517 aa13.58□□□□□ -0.24
SIRPA-201ENST00000356025 RAB34Q9BZG1 259 aa13.58□□□□□ -0.24
SIRPA-201ENST00000356025 AGPAT5Q9NUQ2 364 aa13.58□□□□□ -0.24
SIRPA-201ENST00000356025 USP17L15C9J2P7 530 aa13.58□□□□□ -0.24
SIRPA-201ENST00000356025 USP17L13C9JLJ4 530 aa13.58□□□□□ -0.24
SIRPA-201ENST00000356025 USP17L11C9JVI0 530 aa13.58□□□□□ -0.24
SIRPA-201ENST00000356025 USP17L18D6R9N7 530 aa13.58□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms