RNA–Protein interactions for RNA: ENST00000355379.3

SCAMP3-202, Transcript of secretory carrier membrane protein 3, humanhuman

TSL 1 (best) BASIC

Gene SCAMP3, Length 1,537 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAMP3-202ENST00000355379 ARL6IP4Q66PJ3 421 aaKnown RBP26.05■■□□□ 1.76
SCAMP3-202ENST00000355379 REXO1Q8N1G1 1221 aaKnown RBP26.05■■□□□ 1.76
SCAMP3-202ENST00000355379 ANP32BQ92688 251 aaKnown RBP26.05■■□□□ 1.76
SCAMP3-202ENST00000355379 GLT8D2Q9H1C3 349 aa26.05■■□□□ 1.76
SCAMP3-202ENST00000355379 CAVIN2O95810 425 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 GRIN1Q05586 938 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 ORC2Q13416 577 aaPredicted RBP26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 SYDE2Q5VT97 1194 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 C4orf32Q8N8J7 132 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 RNF214Q8ND24 703 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 HOOK2Q96ED9 719 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 CSRNP2Q9H175 543 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 DEFB129Q9H1M3 183 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 ASTN2O75129 1339 aaPredicted RBP26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 ECE1P42892 770 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 QRICH1Q2TAL8 776 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 ACER1Q8TDN7 264 aa26.04■■□□□ 1.76
SCAMP3-202ENST00000355379 LAD1O00515 517 aa26.03■■□□□ 1.76
SCAMP3-202ENST00000355379 MCM7P33993 719 aa26.03■■□□□ 1.76
SCAMP3-202ENST00000355379 MRPL12P52815 198 aaKnown RBP26.03■■□□□ 1.76
SCAMP3-202ENST00000355379 CDC37Q16543 378 aaPredicted RBP26.03■■□□□ 1.76
SCAMP3-202ENST00000355379 INF2Q27J81 1249 aa26.03■■□□□ 1.76
SCAMP3-202ENST00000355379 VCPKMTQ9H867 229 aa26.03■■□□□ 1.76
SCAMP3-202ENST00000355379 TMEM232C9JQI7 657 aa26.02■■□□□ 1.76
SCAMP3-202ENST00000355379 PLA2G6O60733 806 aa26.02■■□□□ 1.76
SCAMP3-202ENST00000355379 CUL5Q93034 780 aa26.02■■□□□ 1.76
SCAMP3-202ENST00000355379 NUP88Q99567 741 aaPredicted RBP26.02■■□□□ 1.76
SCAMP3-202ENST00000355379 DOCK1Q14185 1865 aa26.02■■□□□ 1.76
SCAMP3-202ENST00000355379 CTNND1O60716 968 aaKnown RBP26.01■■□□□ 1.75
SCAMP3-202ENST00000355379 CLK2P49760 499 aaKnown RBP26.01■■□□□ 1.75
SCAMP3-202ENST00000355379 DCAF15Q66K64 600 aa26.01■■□□□ 1.75
SCAMP3-202ENST00000355379 KRBA2Q6ZNG9 492 aa26.01■■□□□ 1.75
SCAMP3-202ENST00000355379 KIAA1468Q9P260 1216 aa26.01■■□□□ 1.75
SCAMP3-202ENST00000355379 PPP2R3BQ9Y5P8 575 aa26.01■■□□□ 1.75
SCAMP3-202ENST00000355379 CCDC173Q0VFZ6 552 aa26■■□□□ 1.75
SCAMP3-202ENST00000355379 STX1AQ16623 288 aa26■■□□□ 1.75
SCAMP3-202ENST00000355379 NEK8Q86SG6 692 aa26■■□□□ 1.75
SCAMP3-202ENST00000355379 FAM200AQ8TCP9 573 aa26■■□□□ 1.75
SCAMP3-202ENST00000355379 TRPM4Q8TD43 1214 aa26■■□□□ 1.75
SCAMP3-202ENST00000355379 BIN2Q9UBW5 565 aaPredicted RBP26■■□□□ 1.75
SCAMP3-202ENST00000355379 TRAF1Q13077 416 aa25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 SPECC1Q5M775 1068 aa25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 ANGEL2Q5VTE6 544 aaKnown RBP25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 PPP1R9BQ96SB3 815 aa25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 AMNQ9BXJ7 453 aa25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 ZNF341Q9BYN7 854 aa25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 SCAF8Q9UPN6 1271 aaKnown RBP25.99■■□□□ 1.75
SCAMP3-202ENST00000355379 LONP1P36776 959 aaKnown RBP25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 PRPHP41219 470 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 STAT2P52630 851 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 IKQ13123 557 aaPredicted RBP25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 ANO6Q4KMQ2 910 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 KIAA1755Q5JYT7 1200 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 JAKMIP3Q5VZ66 844 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 MCTP2Q6DN12 878 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 CHURC1Q8WUH1 139 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 ANO10Q9NW15 660 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 HOOK1Q9UJC3 728 aaKnown RBP25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 PRR12Q9ULL5 1215 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 PCDHA1Q9Y5I3 950 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 LONRF3Q496Y0 759 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 NBPF12Q5TAG4 269 aaPredicted RBP25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 KANK3Q6NY19 840 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 FAM160B2Q86V87 743 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 FBXO11Q86XK2 927 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 TEX2Q8IWB9 1127 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 CNNM3Q8NE01 707 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 TBCKQ8TEA7 893 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 PSTPIP2Q9H939 334 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 TMEM260Q9NX78 707 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 USP25Q9UHP3 1055 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 ZNF112Q9UJU3 913 aa25.98■■□□□ 1.75
SCAMP3-202ENST00000355379 PITPNM2Q9BZ72 1349 aa25.97■■□□□ 1.75
SCAMP3-202ENST00000355379 VWA3AA6NCI4 1184 aa25.97■■□□□ 1.75
SCAMP3-202ENST00000355379 SPICE1Q8N0Z3 855 aa25.97■■□□□ 1.75
SCAMP3-202ENST00000355379 PYM1Q9BRP8 204 aaKnown RBP25.97■■□□□ 1.75
SCAMP3-202ENST00000355379 RNF181Q9P0P0 153 aa25.97■■□□□ 1.75
SCAMP3-202ENST00000355379 GOLGB1Q14789 3259 aaKnown RBP25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 POLR2DO15514 142 aaKnown RBP25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 YBX3P16989 372 aaKnown RBP eCLIP25.96■■□□□ 1.758e-7■■■□□ 18.5
SCAMP3-202ENST00000355379 EPS15P42566 896 aa25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 IL17AQ16552 155 aa25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 FAM83BQ5T0W9 1011 aa25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 TUBE1Q9UJT0 475 aa25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 FEM1BQ9UK73 627 aa25.96■■□□□ 1.75
SCAMP3-202ENST00000355379 HIRAP54198 1017 aaPredicted RBP25.95■■□□□ 1.74
SCAMP3-202ENST00000355379 LETM2Q2VYF4 491 aa25.95■■□□□ 1.74
SCAMP3-202ENST00000355379 DTHD1Q6ZMT9 781 aa25.95■■□□□ 1.74
SCAMP3-202ENST00000355379 USP49Q70CQ1 688 aa25.95■■□□□ 1.74
SCAMP3-202ENST00000355379 SYMPKQ92797 1274 aaKnown RBP25.95■■□□□ 1.74
SCAMP3-202ENST00000355379 CCDC34Q96HJ3 373 aa25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 EPSTI1Q96J88 318 aa25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 KIAA1683Q9H0B3 1180 aa25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 TMEM60Q9H2L4 133 aa25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 CBX8Q9HC52 389 aa25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 MYH7BA7E2Y1 1941 aa25.94■■□□□ 1.74
SCAMP3-202ENST00000355379 ACTN4O43707 911 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 CCNT1O60563 726 aaKnown RBP25.93■■□□□ 1.74
SCAMP3-202ENST00000355379 LMOD1P29536 600 aaPredicted RBP25.93■■□□□ 1.74
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms