RNA–Protein interactions for RNA: ENST00000354325.2

TRERF1-202, Transcript of transcriptional regulating factor 1, humanhuman

TSL 5 BASIC

Gene TRERF1, Length 4,138 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRERF1-202ENST00000354325 NBPF3Q9H094 633 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 A0A0G2JLW4 131 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 LONP1P36776 959 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 MDH1P40925 334 aaKnown RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 LRIG3Q6UXM1 1119 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 FANCBQ8NB91 859 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 ESR2Q92731 530 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 SCLT1Q96NL6 688 aa13.66□□□□□ -0.22
TRERF1-202ENST00000354325 TRIM6Q9C030 488 aaPredicted RBP13.66□□□□□ -0.22
TRERF1-202ENST00000354325 AGPSO00116 658 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CALML3P27482 149 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 TOB1P50616 345 aaPredicted RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 MEA1Q16626 185 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 PTGISQ16647 500 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 GKAP1Q5VSY0 366 aaPredicted RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 ZNF572Q7Z3I7 529 aaPredicted RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 RNF10Q8N5U6 811 aaKnown RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 ZNF496Q96IT1 587 aaPredicted RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 RABEP2Q9H5N1 569 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 GRID2IPA4D2P6 1211 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 GIGYF2Q6Y7W6 1299 aaKnown RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CCT8L2Q96SF2 557 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CNNM1Q9NRU3 951 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 A0A1W2PQJ5 194 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 RANBP6O60518 1105 aaKnown RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CD44P16070 742 aaKnown RBP13.65□□□□□ -0.22
TRERF1-202ENST00000354325 FIGNQ5HY92 759 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CACNA2D4Q7Z3S7 1137 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CROCCP2Q86T23 111 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 TBC1D10CQ8IV04 446 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 CSGALNACT2Q8N6G5 542 aa13.65□□□□□ -0.22
TRERF1-202ENST00000354325 MAGEA1P43355 309 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 HLTFQ14527 1009 aaKnown RBP eCLIP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 LRRC24Q50LG9 513 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 PDS5AQ29RF7 1337 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 LMTK3Q96Q04 1460 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 SARNPP82979 210 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 ARL6IP4Q66PJ3 421 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 CPLX4Q7Z7G2 160 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 GSPT2Q8IYD1 628 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 SMYD4Q8IYR2 804 aaPredicted RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 TBC1D22AQ8WUA7 517 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 SGSM3Q96HU1 749 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 ZNF512BQ96KM6 892 aaPredicted RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 OSBPL9Q96SU4 736 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 MYL10Q9BUA6 226 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 NSRP1Q9H0G5 558 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 MYO1FO00160 1098 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 UBA7P41226 1012 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 HERVK_113P62684 666 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 KCNB1Q14721 858 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 NAA25Q14CX7 972 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 CADPS2Q86UW7 1296 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 EIF1ADQ8N9N8 165 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 IFT81Q8WYA0 676 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 EPSTI1Q96J88 318 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 NOC4LQ9BVI4 516 aaKnown RBP13.64□□□□□ -0.23
TRERF1-202ENST00000354325 CUEDC2Q9H467 287 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 MCM8Q9UJA3 840 aa13.64□□□□□ -0.23
TRERF1-202ENST00000354325 NEBLO76041 1014 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 SRGNP10124 158 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 KCNV1Q6PIU1 500 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 ZNF654Q8IZM8 581 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 CCDC82Q8N4S0 544 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 MREGQ8N565 214 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 ZKSCAN4Q969J2 545 aaPredicted RBP13.63□□□□□ -0.23
TRERF1-202ENST00000354325 TUBGCP2Q9BSJ2 902 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 LRRC1Q9BTT6 524 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 CNOT10Q9H9A5 744 aaKnown RBP13.63□□□□□ -0.23
TRERF1-202ENST00000354325 GRIN2DO15399 1336 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 GMNCA6NCL1 334 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 LAMA4Q16363 1823 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 NID2Q14112 1375 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 CASP7P55210 303 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 SLC8A3P57103 927 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 NR5A1Q13285 461 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 ZNF174Q15697 407 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 CCDC13Q8IYE1 715 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 MIEF2Q96C03 454 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 SLC40A1Q9NP59 571 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 TMEM94Q12767 1356 aa13.63□□□□□ -0.23
TRERF1-202ENST00000354325 A0A0U1RQJ8 604 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 NLRP5P59047 1200 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 TTC19Q6DKK2 380 aaPredicted RBP13.62□□□□□ -0.23
TRERF1-202ENST00000354325 MYCBPAPQ8TBZ2 947 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 ATP6V0A4Q9HBG4 840 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 MRPL12P52815 198 aaKnown RBP13.62□□□□□ -0.23
TRERF1-202ENST00000354325 CUL1Q13616 776 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 EMC10Q5UCC4 262 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 ZIM3Q96PE6 472 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 PCDHA13Q9Y5I0 950 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 ZNF532Q9HCE3 1301 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 KCTD16Q68DU8 428 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 KIF6Q6ZMV9 814 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 BLZF1Q9H2G9 400 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 TRIM10Q9UDY6 481 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 PRPF3O43395 683 aaKnown RBP13.62□□□□□ -0.23
TRERF1-202ENST00000354325 HEXIM1O94992 359 aaKnown RBP13.62□□□□□ -0.23
TRERF1-202ENST00000354325 CDC25AP30304 524 aa13.62□□□□□ -0.23
TRERF1-202ENST00000354325 ATP2C1P98194 919 aaPredicted RBP13.62□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms