RNA–Protein interactions for RNA: ENST00000354291.8

DDX55-202, Transcript of DEAD-box helicase 55, humanhuman

TSL 5

Gene DDX55, Length 1,004 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX55-202ENST00000354291 ZNF467Q7Z7K2 595 aaPredicted RBP19.11■□□□□ 0.65
DDX55-202ENST00000354291 CPXCR1Q8N123 301 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 SSH3Q8TE77 659 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 SCLYQ96I15 445 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 CCDC17Q96LX7 622 aa19.11■□□□□ 0.65
DDX55-202ENST00000354291 NOC4LQ9BVI4 516 aaKnown RBP19.11■□□□□ 0.65
DDX55-202ENST00000354291 CTAGE5O15320 804 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 PDE6AP16499 860 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 POU3F3P20264 500 aaPredicted RBP19.1■□□□□ 0.65
DDX55-202ENST00000354291 CDK8P49336 464 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 ANKRD35Q8N283 1001 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 LCORLQ8N3X6 602 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 SLC43A3Q8NBI5 491 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 ARNTL2Q8WYA1 636 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 NUP88Q99567 741 aaPredicted RBP19.1■□□□□ 0.65
DDX55-202ENST00000354291 SLF1Q9BQI6 1058 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 WNT8AQ9H1J5 351 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 KANSL2Q9H9L4 492 aa19.1■□□□□ 0.65
DDX55-202ENST00000354291 CTDP1Q9Y5B0 961 aaPredicted RBP19.1■□□□□ 0.65
DDX55-202ENST00000354291 GBF1Q92538 1859 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 COL11A1P12107 1806 aaPredicted RBP19.09■□□□□ 0.65
DDX55-202ENST00000354291 ZNF532Q9HCE3 1301 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 EPOPA6NHQ4 379 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 SMIM22K7EJ46 135 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 TTLL4Q14679 1199 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 ARMCX2Q7L311 632 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 ARMT1Q9H993 441 aa19.09■□□□□ 0.65
DDX55-202ENST00000354291 CYP2D7A0A087X1C5 515 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 PRKAB2O43741 272 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 B4GALT4O60513 344 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 CABYRO75952 493 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 TNFAIP2Q03169 654 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 ZKSCAN2Q63HK3 967 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 CCDC144CPQ8IYA2 1237 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 C1orf115Q9H7X2 142 aa19.08■□□□□ 0.64
DDX55-202ENST00000354291 GRIN2DO15399 1336 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 C11orf97A0A1B0GVM6 126 aaPredicted RBP19.07■□□□□ 0.64
DDX55-202ENST00000354291 PI4K2BG5E9Z4 385 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 ZBED4O75132 1171 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 TTF1Q15361 905 aaPredicted RBP19.07■□□□□ 0.64
DDX55-202ENST00000354291 DEFB128Q7Z7B8 93 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 UIMC1Q96RL1 719 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 AP5M1Q9H0R1 490 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 RAVER2Q9HCJ3 691 aaKnown RBP19.07■□□□□ 0.64
DDX55-202ENST00000354291 CD320Q9NPF0 282 aa19.07■□□□□ 0.64
DDX55-202ENST00000354291 NOP58Q9Y2X3 529 aaKnown RBP19.07■□□□□ 0.64
DDX55-202ENST00000354291 DYNC1LI2O43237 492 aaPredicted RBP19.06■□□□□ 0.64
DDX55-202ENST00000354291 PSMC6P62333 389 aa19.06■□□□□ 0.64
DDX55-202ENST00000354291 FSCN1Q16658 493 aaKnown RBP19.06■□□□□ 0.64
DDX55-202ENST00000354291 AACSQ86V21 672 aa19.06■□□□□ 0.64
DDX55-202ENST00000354291 AMOTL1Q8IY63 956 aa19.06■□□□□ 0.64
DDX55-202ENST00000354291 PRPF38AQ8NAV1 312 aaKnown RBP19.06■□□□□ 0.64
DDX55-202ENST00000354291 VWCEQ96DN2 955 aa19.06■□□□□ 0.64
DDX55-202ENST00000354291 FGD4Q96M96 766 aa19.06■□□□□ 0.64
DDX55-202ENST00000354291 ASTN1O14525 1302 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 USP17L12C9JPN9 530 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 USP17L21D6R901 530 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 ZEB2O60315 1214 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 PTGS1P23219 599 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 MRE11P49959 708 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 NKX3-2P78367 333 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 C12orf60Q5U649 245 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 AGBL1Q96MI9 1066 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 NAV1Q8NEY1 1877 aa19.05■□□□□ 0.64
DDX55-202ENST00000354291 TCRBV5S4A2TA0A5A2 114 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 CNTN2Q02246 1040 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 TAP1Q03518 808 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 C16orf86Q6ZW13 317 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 TLK2Q86UE8 772 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 TMEM57Q8N5G2 664 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 KIFC2Q96AC6 838 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 KATNBL1Q9H079 304 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 ATP8A2Q9NTI2 1148 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 PARP14Q460N5 1801 aa19.04■□□□□ 0.64
DDX55-202ENST00000354291 F5H6K3 240 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 GOLIM4O00461 696 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 ARHGEF15O94989 841 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 MBD4O95243 580 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 CYP2C9P11712 490 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 ACTN1P12814 892 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 KLRC3Q07444 240 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 GRB10Q13322 594 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 SLFNL1Q499Z3 407 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 DNAJC2Q99543 621 aaKnown RBP19.03■□□□□ 0.64
DDX55-202ENST00000354291 SEZ6LQ9BYH1 1024 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 HOMER2Q9NSB8 354 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 FBXO40Q9UH90 709 aa19.03■□□□□ 0.64
DDX55-202ENST00000354291 GNEQ9Y223 722 aaKnown RBP19.03■□□□□ 0.64
DDX55-202ENST00000354291 PRR33A8MZF0 331 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 KIF28PB7ZC32 967 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 ATP2A1O14983 1001 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 PFKMP08237 780 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 FTSJ3Q8IY81 847 aaKnown RBP19.02■□□□□ 0.64
DDX55-202ENST00000354291 CHST13Q8NET6 341 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 BCL11AQ9H165 835 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 ALDH8A1Q9H2A2 487 aaPredicted RBP19.02■□□□□ 0.64
DDX55-202ENST00000354291 TRMT13Q9NUP7 481 aaKnown RBP19.02■□□□□ 0.64
DDX55-202ENST00000354291 MCM3APO60318 1980 aa19.02■□□□□ 0.64
DDX55-202ENST00000354291 NDUFB10O96000 172 aa19.01■□□□□ 0.63
DDX55-202ENST00000354291 SMPD1P17405 629 aa19.01■□□□□ 0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms