RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 SLF2Q8IX21 1173 aa24.96■■□□□ 1.59
UPF3A-201ENST00000351487 ADSSL1Q8N142 457 aa24.96■■□□□ 1.59
UPF3A-201ENST00000351487 UBXN4Q92575 508 aa24.96■■□□□ 1.59
UPF3A-201ENST00000351487 KCNJ18B7U540 433 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 GOLGA8HP0CJ92 632 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 UBA7P41226 1012 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 KCNJ12Q14500 433 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 ARHGAP29Q52LW3 1261 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 RBM17Q96I25 401 aaKnown RBP24.95■■□□□ 1.58
UPF3A-201ENST00000351487 AK8Q96MA6 479 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 CUEDC2Q9H467 287 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 MAGEF1Q9HAY2 307 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 MRFAP1Q9Y605 127 aa24.95■■□□□ 1.58
UPF3A-201ENST00000351487 PP2D1A8MPX8 630 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 H7C1D1 291 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 TPM1P09493 284 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 GYS1P13807 737 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 FXR1P51114 621 aaKnown RBP eCLIP24.94■■□□□ 1.58
UPF3A-201ENST00000351487 RASGRP2Q7LDG7 609 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 TBC1D22AQ8WUA7 517 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 PRDM10Q9NQV6 1147 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 MTMR7Q9Y216 660 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 KLRC4O43908 158 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 NAPAP54920 295 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 MFSD14BQ5SR56 506 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 CPLX3Q8WVH0 158 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 CARD6Q9BX69 1037 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 PLIN4Q96Q06 1357 aa24.94■■□□□ 1.58
UPF3A-201ENST00000351487 COBLO75128 1261 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 BBOX1O75936 387 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 RHOBTB3O94955 611 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 GJD4Q96KN9 370 aaPredicted RBP24.93■■□□□ 1.58
UPF3A-201ENST00000351487 ZNF446Q9NWS9 450 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 UBAP1LF5GYI3 381 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 SERPINB2P05120 415 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 GNA11P29992 359 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 HOXA10P31260 410 aaPredicted RBP24.93■■□□□ 1.58
UPF3A-201ENST00000351487 NONOQ15233 471 aaKnown RBP eCLIP24.93■■□□□ 1.58
UPF3A-201ENST00000351487 RASSF8Q8NHQ8 419 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 C6orf50Q9HD87 102 aa24.93■■□□□ 1.58
UPF3A-201ENST00000351487 OR52Z1P0C646 297 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 RRP36Q96EU6 259 aaKnown RBP24.92■■□□□ 1.58
UPF3A-201ENST00000351487 CEP95Q96GE4 821 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 TAB2Q9NYJ8 693 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 ESYT2A0FGR8 921 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 DMTNQ08495 405 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 ORC2Q13416 577 aaPredicted RBP24.92■■□□□ 1.58
UPF3A-201ENST00000351487 UTP14CQ5TAP6 766 aaKnown RBP24.92■■□□□ 1.58
UPF3A-201ENST00000351487 IRF2BP1Q8IU81 584 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 VPS16Q9H269 839 aa24.92■■□□□ 1.58
UPF3A-201ENST00000351487 CLCN6P51797 869 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 USP17L2Q6R6M4 530 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 TMTC1Q8IUR5 882 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 KRT222Q8N1A0 295 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 GIMAP8Q8ND71 665 aaPredicted RBP24.91■■□□□ 1.58
UPF3A-201ENST00000351487 TBC1D16Q8TBP0 767 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 CPVLQ9H3G5 476 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 ABHD10Q9NUJ1 306 aa24.91■■□□□ 1.58
UPF3A-201ENST00000351487 QSER1Q2KHR3 1735 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 LRRC15Q8TF66 581 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 GTPBP4Q9BZE4 634 aaKnown RBP24.9■■□□□ 1.58
UPF3A-201ENST00000351487 POLLQ9UGP5 575 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 SEC63Q9UGP8 760 aaKnown RBP24.9■■□□□ 1.58
UPF3A-201ENST00000351487 SMCO2A6NFE2 343 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 hCG_1984214I3L0E3 225 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 NEK8Q86SG6 692 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 ZNF713Q8N859 430 aaPredicted RBP24.9■■□□□ 1.58
UPF3A-201ENST00000351487 MAPK8IP1Q9UQF2 711 aa24.9■■□□□ 1.58
UPF3A-201ENST00000351487 ONECUT3O60422 494 aaPredicted RBP24.89■■□□□ 1.58
UPF3A-201ENST00000351487 EEF1GP26641 437 aaKnown RBP24.89■■□□□ 1.58
UPF3A-201ENST00000351487 STIM1Q13586 685 aa24.89■■□□□ 1.58
UPF3A-201ENST00000351487 CRAMP1Q96RY5 1269 aa24.89■■□□□ 1.58
UPF3A-201ENST00000351487 THAP9Q9H5L6 903 aa24.89■■□□□ 1.58
UPF3A-201ENST00000351487 PPP2R3AQ06190 1150 aa24.89■■□□□ 1.57
UPF3A-201ENST00000351487 CABP7Q86V35 215 aa24.89■■□□□ 1.57
UPF3A-201ENST00000351487 RIOX1Q9H6W3 641 aa24.89■■□□□ 1.57
UPF3A-201ENST00000351487 TTF2Q9UNY4 1162 aaKnown RBP24.89■■□□□ 1.57
UPF3A-201ENST00000351487 TRIM49BA6NDI0 452 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 PSMA7O14818 248 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 PLCG1P19174 1290 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 ARGLU1Q9NWB6 273 aaPredicted RBP24.88■■□□□ 1.57
UPF3A-201ENST00000351487 LGALS16A8MUM7 142 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 CCNT1O60563 726 aaKnown RBP24.88■■□□□ 1.57
UPF3A-201ENST00000351487 PMS1P54277 932 aaKnown RBP24.88■■□□□ 1.57
UPF3A-201ENST00000351487 ERVK-24P63145 666 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 TXNRD1Q16881 649 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 LETM2Q2VYF4 491 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 SOGA3Q5TF21 947 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 LZTFL1Q9NQ48 299 aa24.88■■□□□ 1.57
UPF3A-201ENST00000351487 C10orf71Q711Q0 1435 aa24.87■■□□□ 1.57
UPF3A-201ENST00000351487 A0A1W2PQC6 194 aa24.87■■□□□ 1.57
UPF3A-201ENST00000351487 KLRG2A4D1S0 409 aaPredicted RBP24.87■■□□□ 1.57
UPF3A-201ENST00000351487 CYP26C1Q6V0L0 522 aa24.87■■□□□ 1.57
UPF3A-201ENST00000351487 RSRC2Q7L4I2 434 aaKnown RBP24.87■■□□□ 1.57
UPF3A-201ENST00000351487 NOC3LQ8WTT2 800 aaKnown RBP24.87■■□□□ 1.57
UPF3A-201ENST00000351487 PIGSQ96S52 555 aa24.87■■□□□ 1.57
UPF3A-201ENST00000351487 NUP88Q99567 741 aaPredicted RBP24.87■■□□□ 1.57
UPF3A-201ENST00000351487 DAGLAQ9Y4D2 1042 aa24.87■■□□□ 1.57
UPF3A-201ENST00000351487 KIF5CO60282 957 aa24.86■■□□□ 1.57
UPF3A-201ENST00000351487 UBXN1Q04323 297 aa24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms