RNA–Protein interactions for RNA: ENST00000350697.7

SEC13-202, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SEC13, Length 1,425 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-202ENST00000350697 GPR142Q7Z601 462 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 PLEKHH3Q7Z736 793 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 NCAPG2Q86XI2 1143 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 RAB11FIP4Q86YS3 637 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 FANCBQ8NB91 859 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 LZTS2Q9BRK4 669 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 ALDH8A1Q9H2A2 487 aaPredicted RBP16.22■□□□□ 0.19
SEC13-202ENST00000350697 MROH8Q9H579 483 aa16.22■□□□□ 0.19
SEC13-202ENST00000350697 NAP1L2Q9ULW6 460 aaPredicted RBP16.22■□□□□ 0.19
SEC13-202ENST00000350697 ICAM1P05362 532 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 SMARCA1P28370 1054 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 EVCP57679 992 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 CCDC144CPQ8IYA2 1237 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 JMJD4Q9H9V9 463 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 SRRDQ9UH36 339 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 PNMA2Q9UL42 364 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 BAZ2BQ9UIF8 2168 aaKnown RBP16.21■□□□□ 0.19
SEC13-202ENST00000350697 ZNF536O15090 1300 aa16.21■□□□□ 0.19
SEC13-202ENST00000350697 GOLGA8AA7E2F4 631 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 GOLGA8BA8MQT2 603 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 NEK4P51957 841 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 PRMT2P55345 433 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 PPP2R5BQ15173 497 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 ANKRD1Q15327 319 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 PKN2Q16513 984 aaKnown RBP16.2■□□□□ 0.18
SEC13-202ENST00000350697 CDC37Q16543 378 aaPredicted RBP16.2■□□□□ 0.18
SEC13-202ENST00000350697 RTN1Q16799 776 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 AGBL1Q96MI9 1066 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 TBC1D32Q96NH3 1257 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 KIF2CQ99661 725 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 RIOX1Q9H6W3 641 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 VAT1LQ9HCJ6 419 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 RBM28Q9NW13 759 aaKnown RBP16.2■□□□□ 0.18
SEC13-202ENST00000350697 RIPK3Q9Y572 518 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 IVNS1ABPQ9Y6Y0 642 aa16.2■□□□□ 0.18
SEC13-202ENST00000350697 STRNO43815 780 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 SLC4A3P48751 1232 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 METAP2P50579 478 aaKnown RBP eCLIP16.19■□□□□ 0.181e-7■■□□□ 13.6
SEC13-202ENST00000350697 SLC35G1Q2M3R5 365 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 TKFCQ3LXA3 575 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 IFFO2Q5TF58 517 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 NBPF11Q86T75 865 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 CHST13Q8NET6 341 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 SOCS4Q8WXH5 440 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 MTMR8Q96EF0 704 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 SPZ1Q9BXG8 430 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 TSHZ2Q9NRE2 1034 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 FBXO40Q9UH90 709 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 CCPG1Q9ULG6 757 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 PTPN22Q9Y2R2 807 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 MYH6P13533 1939 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 NID2Q14112 1375 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 CCDC196A0A1B0GTZ2 297 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 SLC15A5A6NIM6 579 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 CYTH3O43739 400 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 PLEKHA8P1O95397 391 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 ALAS1P13196 640 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 PTPREP23469 700 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 PDIA3P30101 505 aaKnown RBP16.19■□□□□ 0.18
SEC13-202ENST00000350697 FLT3LGP49771 235 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 PRKCZQ05513 592 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 QRICH1Q2TAL8 776 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 TMTC3Q6ZXV5 915 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 ABRAQ8N0Z2 381 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 ZNF274Q96GC6 653 aaPredicted RBP16.19■□□□□ 0.18
SEC13-202ENST00000350697 NUDT12Q9BQG2 462 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 GJD2Q9UKL4 321 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 HPS5Q9UPZ3 1129 aa16.19■□□□□ 0.18
SEC13-202ENST00000350697 SMCHD1A6NHR9 2005 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 PLXNB2O15031 1838 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 ZBTB5O15062 677 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 FCER1AP12319 257 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 AK2P54819 239 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 GRB14Q14449 540 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 MORN1Q5T089 497 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 FBXO46Q6PJ61 603 aaPredicted RBP16.18■□□□□ 0.18
SEC13-202ENST00000350697 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.18■□□□□ 0.18
SEC13-202ENST00000350697 SRBD1Q8N5C6 995 aaKnown RBP16.18■□□□□ 0.18
SEC13-202ENST00000350697 TRERF1Q96PN7 1200 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 PIGSQ96S52 555 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 ACAD9Q9H845 621 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 HOMER2Q9NSB8 354 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 RNF146Q9NTX7 359 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 GABRQQ9UN88 632 aa16.18■□□□□ 0.18
SEC13-202ENST00000350697 CDC27P30260 824 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 IRF5Q13568 498 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 KCTD2Q14681 263 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 RABEP1Q15276 862 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 FBXO11Q86XK2 927 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 HOMER1Q86YM7 354 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 CMTR1Q8N1G2 835 aaKnown RBP16.17■□□□□ 0.18
SEC13-202ENST00000350697 RAET1EQ8TD07 263 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 USP6NLQ92738 828 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 RRP36Q96EU6 259 aaKnown RBP16.17■□□□□ 0.18
SEC13-202ENST00000350697 MMP19Q99542 508 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 LARP6Q9BRS8 491 aaKnown RBP16.17■□□□□ 0.18
SEC13-202ENST00000350697 AMNQ9BXJ7 453 aa16.17■□□□□ 0.18
SEC13-202ENST00000350697 FAM217BQ9NTX9 383 aaPredicted RBP16.17■□□□□ 0.18
SEC13-202ENST00000350697 PNMA6FA0A0J9YX94 578 aa16.16■□□□□ 0.18
SEC13-202ENST00000350697 ADORA2AP29274 412 aa16.16■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms