RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 NDUFA8P51970 172 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 LMBR1Q8WVP7 490 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 MRFAP1L1Q96HT8 127 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 IFT74Q96LB3 600 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 TMEM47Q9BQJ4 181 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 H0YCG3 227 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 BACH1O14867 736 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 GAS7O60861 476 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 FDX1P10109 184 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 SMARCA1P28370 1054 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 NCBP1Q09161 790 aaKnown RBP13.56□□□□□ -0.24
SMAD9-201ENST00000350148 STOX1Q6ZVD7 989 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 GOLGA5Q8TBA6 731 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 NOL12Q9UGY1 213 aaKnown RBP eCLIP13.56□□□□□ -0.24
SMAD9-201ENST00000350148 NFE2L3Q9Y4A8 694 aa13.56□□□□□ -0.24
SMAD9-201ENST00000350148 V9GYY5 206 aaPredicted RBP13.56□□□□□ -0.24
SMAD9-201ENST00000350148 TRAF5O00463 557 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 PLSCR1O15162 318 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 KRT86O43790 486 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 CDC25BP30305 580 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 ZYXQ15942 572 aaKnown RBP13.55□□□□□ -0.24
SMAD9-201ENST00000350148 SLC15A2Q16348 729 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 OTUD6AQ7L8S5 288 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 STAT2P52630 851 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 CCDC84Q86UT8 332 aaPredicted RBP13.55□□□□□ -0.24
SMAD9-201ENST00000350148 NOC4LQ9BVI4 516 aaKnown RBP13.55□□□□□ -0.24
SMAD9-201ENST00000350148 TEKT3Q9BXF9 490 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 SLTMQ9NWH9 1034 aaKnown RBP eCLIP13.55□□□□□ -0.24
SMAD9-201ENST00000350148 TRMT1Q9NXH9 659 aaKnown RBP13.55□□□□□ -0.24
SMAD9-201ENST00000350148 NELFBQ8WX92 580 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 MMRN2Q9H8L6 949 aa13.55□□□□□ -0.24
SMAD9-201ENST00000350148 RAD17O75943 681 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 SLFN14P0C7P3 912 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 SYMPKQ92797 1274 aaKnown RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 PIGSQ96S52 555 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 PLIN2Q99541 437 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 IMPG2Q9BZV3 1241 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 EN1Q05925 392 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 FBXL16Q8N461 479 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 GPR101Q96P66 508 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 WDR11Q9BZH6 1224 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 SLC5A4Q9NY91 659 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 GPR75-ASB3A0A0A6YYF3 556 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 STX10O60499 249 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 TACC1O75410 805 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 IBSPP21815 317 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 GNG11P61952 73 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 SPECC1Q5M775 1068 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 CCDC42Q96M95 316 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 IVNS1ABPQ9Y6Y0 642 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 GOLGA6L10A6NI86 522 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 TBC1D8BQ0IIM8 1120 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 PNOCQ13519 176 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 BRDTQ58F21 947 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 APOBEC3FQ8IUX4 373 aaKnown RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 CLRN2A0PK11 232 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 PTGS1P23219 599 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 ABCD1P33897 745 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 GTF2F1P35269 517 aaKnown RBP eCLIP13.54□□□□□ -0.247e-6■■■■□ 21.3
SMAD9-201ENST00000350148 MNAT1P51948 309 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 HERC4Q5GLZ8 1057 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 NSMFQ6X4W1 530 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 CDAN1Q8IWY9 1227 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 BAG1Q99933 345 aaPredicted RBP13.54□□□□□ -0.24
SMAD9-201ENST00000350148 SPZ1Q9BXG8 430 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 CSRNP2Q9H175 543 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 CCPG1Q9ULG6 757 aa13.54□□□□□ -0.24
SMAD9-201ENST00000350148 MIER3Q7Z3K6 550 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 CPXCR1Q8N123 301 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 IGSF22Q8N9C0 903 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 PLVAPQ9BX97 442 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 GINM1Q9NU53 330 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 CYP2D6P10635 497 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 SPATA1Q5VX52 437 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 IGDCC4Q8TDY8 1250 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 FAM107BQ9H098 131 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 ZNRF3Q9ULT6 936 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 DAGLAQ9Y4D2 1042 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 SLFNL1Q499Z3 407 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 TMTC1Q8IUR5 882 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 CDHR1Q96JP9 859 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 PHLPP1O60346 1717 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 KIF5AQ12840 1032 aa13.53□□□□□ -0.24
SMAD9-201ENST00000350148 C15orf52Q6ZUT6 534 aaKnown RBP13.53□□□□□ -0.24
SMAD9-201ENST00000350148 TUBBP07437 444 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 MYCLP12524 364 aaPredicted RBP13.52□□□□□ -0.24
SMAD9-201ENST00000350148 PTPREP23469 700 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 AOC3Q16853 763 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 TMCO3Q6UWJ1 677 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 CYP26C1Q6V0L0 522 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 PLA2G4DQ86XP0 818 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 VPS33BQ9H267 617 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 SERPINA10Q9UK55 444 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 DLG5Q8TDM6 1919 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 ZBTB5O15062 677 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 SLC26A4O43511 780 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 RPN1P04843 607 aaKnown RBP13.52□□□□□ -0.24
SMAD9-201ENST00000350148 ARHGEF16Q5VV41 709 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 FEM1BQ9UK73 627 aa13.52□□□□□ -0.24
SMAD9-201ENST00000350148 PCDHB13Q9Y5F0 798 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms