RNA–Protein interactions for RNA: ENST00000349062.6

TRIM4-201, Transcript of tripartite motif containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TRIM4, Length 3,374 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM4-201ENST00000349062 USP17L15C9J2P7 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L13C9JLJ4 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L11C9JVI0 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L18D6R9N7 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L22D6RA61 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L17D6RBQ6 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L19D6RCP7 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L20D6RJB6 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 PDHBP11177 359 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L24Q0WX57 530 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 NONOQ15233 471 aaKnown RBP eCLIP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 KANK3Q6NY19 840 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 USP17L6PQ6QN14 398 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 CCAR2Q8N163 923 aaKnown RBP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 PCMTD1Q96MG8 357 aaPredicted RBP15.69■□□□□ 0.1
TRIM4-201ENST00000349062 MED15Q96RN5 788 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 MTMR4Q9NYA4 1195 aa15.69■□□□□ 0.1
TRIM4-201ENST00000349062 BCORQ6W2J9 1755 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 PALM3A6NDB9 673 aaPredicted RBP15.68■□□□□ 0.1
TRIM4-201ENST00000349062 CBFA2T2O43439 604 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 SEPT2Q15019 361 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 MLKLQ8NB16 471 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 TCP11L1Q9NUJ3 509 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 DACH1Q9UI36 760 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 ARAP2Q8WZ64 1704 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 POTEMA6NI47 508 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 N4BP3O15049 544 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 GSDMDP57764 484 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 ASIC1P78348 528 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 MORC3Q14149 939 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 MIGA2Q7L4E1 593 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 CDK5RAP3Q96JB5 506 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 FEZ1Q99689 392 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 MYH15Q9Y2K3 1946 aa15.68■□□□□ 0.1
TRIM4-201ENST00000349062 DNAI1Q9UI46 699 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 NEMFO60524 1076 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 SLC1A4P43007 532 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 APOBEC3HQ6NTF7 200 aaKnown RBP15.67■□□□□ 0.1
TRIM4-201ENST00000349062 MTRQ99707 1265 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 ZNF277Q9NRM2 450 aaPredicted RBP15.67■□□□□ 0.1
TRIM4-201ENST00000349062 TBC1D7Q9P0N9 293 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 PDS5AQ29RF7 1337 aaKnown RBP15.67■□□□□ 0.1
TRIM4-201ENST00000349062 IKBKBO14920 756 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 CACNB1Q02641 598 aaPredicted RBP15.67■□□□□ 0.1
TRIM4-201ENST00000349062 SLC30A10Q6XR72 485 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 INTS13Q9NVM9 706 aa15.67■□□□□ 0.1
TRIM4-201ENST00000349062 CDC25BP30305 580 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 MTF1Q14872 753 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 CERKLQ49MI3 558 aaPredicted RBP15.66■□□□□ 0.1
TRIM4-201ENST00000349062 ADGRF4Q8IZF3 695 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 ZNF579Q8NAF0 562 aaKnown RBP15.66■□□□□ 0.1
TRIM4-201ENST00000349062 NELFBQ8WX92 580 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 OSBPL5Q9H0X9 879 aaPredicted RBP15.66■□□□□ 0.1
TRIM4-201ENST00000349062 PLCG1P19174 1290 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 CABP7Q86V35 215 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 SCN7AQ01118 1682 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 CTIFO43310 598 aaKnown RBP15.66■□□□□ 0.1
TRIM4-201ENST00000349062 TTLL1O95922 423 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 BMP15O95972 392 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 EEF2P13639 858 aaKnown RBP15.66■□□□□ 0.1
TRIM4-201ENST00000349062 GNA11P29992 359 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 E4F1Q66K89 784 aaPredicted RBP15.66■□□□□ 0.1
TRIM4-201ENST00000349062 PPFIBP1Q86W92 1011 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 ZSWIM4Q9H7M6 989 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 LZTFL1Q9NQ48 299 aa15.66■□□□□ 0.1
TRIM4-201ENST00000349062 RPN1P04843 607 aaKnown RBP15.65■□□□□ 0.1
TRIM4-201ENST00000349062 NEK8Q86SG6 692 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 TRIM47Q96LD4 638 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 PAXBP1Q9Y5B6 917 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 FAM170AA1A519 330 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 ADCY7P51828 1080 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 UBXN2AP68543 259 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 FCHSD1Q86WN1 690 aa15.65■□□□□ 0.1
TRIM4-201ENST00000349062 SHMT1P34896 483 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 IGSF22Q8N9C0 903 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 CCDC150Q8NCX0 1101 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 PRMT6Q96LA8 375 aaPredicted RBP15.64■□□□□ 0.09
TRIM4-201ENST00000349062 OR52Z1P0C646 297 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 PRCPP42785 496 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 LARGE2Q8N3Y3 721 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 CCDC12Q8WUD4 166 aaPredicted RBP15.64■□□□□ 0.09
TRIM4-201ENST00000349062 SLC39A2Q9NP94 309 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 POLR3GO15318 223 aaPredicted RBP15.64■□□□□ 0.09
TRIM4-201ENST00000349062 SLC37A4O43826 429 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 URI1O94763 535 aaPredicted RBP15.64■□□□□ 0.09
TRIM4-201ENST00000349062 GH2P01242 217 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 CALCRLQ16602 461 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 KMT5BQ4FZB7 885 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 VSTM4Q8IW00 320 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 KRT222Q8N1A0 295 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 PPP1R13BQ96KQ4 1090 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 CSRNP1Q96S65 589 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 BPIFA3Q9BQP9 254 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 DISC1Q9NRI5 854 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 A0A1B0GUL6 1792 aa15.64■□□□□ 0.09
TRIM4-201ENST00000349062 HOXA13P31271 388 aaPredicted RBP15.63■□□□□ 0.09
TRIM4-201ENST00000349062 PDE4DQ08499 809 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 LRRC41Q15345 812 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 FILIP1LQ4L180 1135 aa15.63■□□□□ 0.09
TRIM4-201ENST00000349062 AKT1S1Q96B36 256 aa15.63■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms