RNA–Protein interactions for RNA: ENST00000348513.10

SMARCE1-202, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMARCE1, Length 5,840 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-202ENST00000348513 TMEM2Q9UHN6 1383 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 PPARAQ07869 468 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 CALCRLQ16602 461 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 KRT40Q6A162 431 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 CNNM4Q6P4Q7 775 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 SND1Q7KZF4 910 aaKnown RBP eCLIP12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 CSGALNACT2Q8N6G5 542 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 CASP10Q92851 521 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 OLFM3Q96PB7 478 aa12.17□□□□□ -0.46
SMARCE1-202ENST00000348513 ERVV-2B6SEH9 535 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 ALDH1B1P30837 517 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 TRPC3Q13507 836 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 LRRC24Q50LG9 513 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 MYCT1Q8N699 235 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 RNF34Q969K3 372 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 TNFAIP3P21580 790 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 KCNQ4P56696 695 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 APBB1IPQ7Z5R6 666 aaPredicted RBP12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 SUPT20HQ8NEM7 779 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 CCDC77Q9BR77 488 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 PAGR1Q9BTK6 254 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 AGTPBP1Q9UPW5 1226 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 ZMYM4Q5VZL5 1548 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 SYNRGQ9UMZ2 1314 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 ATP2A1O14983 1001 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 PHBP35232 272 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 ATP1A2P50993 1020 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 ADCY2Q08462 1091 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 FBXW10Q5XX13 1052 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 NANOGNBQ7Z5D8 188 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 MRRFQ96E11 262 aaKnown RBP12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 TSGA10Q9BZW7 698 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 SPTLC3Q9NUV7 552 aa12.16□□□□□ -0.46
SMARCE1-202ENST00000348513 USP17L12C9JPN9 530 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 USP17L21D6R901 530 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 TNNC1P63316 161 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 APBA1Q02410 837 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 TMCO4Q5TGY1 634 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 CCDC197Q8NCU1 140 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 MPP4Q96JB8 637 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 TRAIPQ9BWF2 469 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 CBX8Q9HC52 389 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 PBRM1Q86U86 1689 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 MAP3K7O43318 606 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 CALUO43852 315 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 GADD45BO75293 160 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 ATP2A2P16615 1042 aaKnown RBP12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 PHEXP78562 749 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 RASA3Q14644 834 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 HERC4Q5GLZ8 1057 aaPredicted RBP12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 CCDC62Q6P9F0 684 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 BEND3Q5T5X7 828 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 SPATA17Q96L03 361 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 FAM167BQ9BTA0 163 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 NKIRAS1Q9NYS0 192 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 TMEM63CQ9P1W3 806 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 PHLPP2Q6ZVD8 1323 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 SPOPO43791 374 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 KDM1AO60341 852 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 STX10O60499 249 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 GCNT3O95395 438 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 CNGA4Q8IV77 575 aa12.15□□□□□ -0.46
SMARCE1-202ENST00000348513 LRRIQ3A6PVS8 624 aaPredicted RBP12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 NDC80O14777 642 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 SKOR1P84550 965 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 UAP1Q16222 522 aaPredicted RBP12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 TAOK1Q7L7X3 1001 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 UBE2Q1Q7Z7E8 422 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 CROCCP2Q86T23 111 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 C2CD5Q86YS7 1000 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 IQCDQ96DY2 449 aa12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 LLPHQ9BRT6 129 aaKnown RBP12.15□□□□□ -0.47
SMARCE1-202ENST00000348513 TMEM232C9JQI7 657 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 GOLGA8HP0CJ92 632 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 FAM133BQ5BKY9 247 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 USPL1Q5W0Q7 1092 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 VPS52Q8N1B4 723 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 LRRC47Q8N1G4 583 aaKnown RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 AZI2Q9H6S1 392 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 TAB2Q9NYJ8 693 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 KCNG1Q9UIX4 513 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 AOX1Q06278 1338 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 PTPRTO14522 1441 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 KRT19P08727 400 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 TPD52P55327 224 aaPredicted RBP12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 PPARDQ03181 441 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 DMPKQ09013 629 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 MTMR3Q13615 1198 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 SEL1L2Q5TEA6 688 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 TPH2Q8IWU9 490 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 ZNF202O95125 648 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 CDC25BP30305 580 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 BAG6P46379 1132 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 PAK1Q13153 545 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 C8orf74Q6P047 294 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 CABP7Q86V35 215 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 MFN1Q8IWA4 741 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 LRRC8AQ8IWT6 810 aa12.14□□□□□ -0.47
SMARCE1-202ENST00000348513 RPGRIP1Q96KN7 1286 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 77.9 ms