RNA–Protein interactions for RNA: ENST00000345009.8

SNCA-202, Transcript of synuclein alpha, humanhuman

TSL 1 (best) BASIC

Gene SNCA, Length 1,096 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-202ENST00000345009 ERVK-24P63145 666 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 PLS1Q14651 629 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 PPP2R5BQ15173 497 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 ANKRD1Q15327 319 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 POTEGQ6S5H5 508 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 BTNL9Q6UXG8 535 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 Q6ZUG5 572 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 ZNF654Q8IZM8 581 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 ATG4CQ96DT6 458 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 BACH2Q9BYV9 841 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 PDRG1Q9NUG6 133 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 FBXO28Q9NVF7 368 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 FRMPD2Q68DX3 1309 aaPredicted RBP13.79□□□□□ -0.2
SNCA-202ENST00000345009 ADGRA2Q96PE1 1338 aa13.79□□□□□ -0.2
SNCA-202ENST00000345009 CCDC196A0A1B0GTZ2 297 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 KLRF2D3W0D1 207 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 ZBTB43O43298 467 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 FMNL1O95466 1100 aaPredicted RBP13.78□□□□□ -0.2
SNCA-202ENST00000345009 SLC25A27O95847 323 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 STAT3P40763 770 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 PSMC4P43686 418 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 RCAN1P53805 252 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 LACTBP83111 547 aaPredicted RBP13.78□□□□□ -0.2
SNCA-202ENST00000345009 TROAPQ12815 778 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 TRAF1Q13077 416 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 GRM4Q14833 912 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 SYDE2Q5VT97 1194 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 COA7Q96BR5 231 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 IL17RAQ96F46 866 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 TCEANC2Q96MN5 208 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 TEX13BQ9BXU2 312 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 SPATC1LQ9H0A9 340 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 EFCC1Q9HA90 598 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 SLC38A10Q9HBR0 1119 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 PRR12Q9ULL5 1215 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 NAP1L2Q9ULW6 460 aaPredicted RBP13.78□□□□□ -0.2
SNCA-202ENST00000345009 IVNS1ABPQ9Y6Y0 642 aa13.78□□□□□ -0.2
SNCA-202ENST00000345009 PALM3A6NDB9 673 aaPredicted RBP13.77□□□□□ -0.21
SNCA-202ENST00000345009 GOLGA8HP0CJ92 632 aa13.77□□□□□ -0.21
SNCA-202ENST00000345009 CPA1P15085 419 aa13.77□□□□□ -0.21
SNCA-202ENST00000345009 RBM25P49756 843 aaKnown RBP13.77□□□□□ -0.21
SNCA-202ENST00000345009 PRMT2P55345 433 aa13.77□□□□□ -0.21
SNCA-202ENST00000345009 FANCBQ8NB91 859 aa13.77□□□□□ -0.21
SNCA-202ENST00000345009 BRF1Q92994 677 aa13.77□□□□□ -0.21
SNCA-202ENST00000345009 UPF3BQ9BZI7 483 aaKnown RBP13.77□□□□□ -0.21
SNCA-202ENST00000345009 MROH8Q9H579 483 aa13.77□□□□□ -0.21
SNCA-202ENST00000345009 GPHNQ9NQX3 736 aaPredicted RBP13.77□□□□□ -0.21
SNCA-202ENST00000345009 RBM28Q9NW13 759 aaKnown RBP13.77□□□□□ -0.21
SNCA-202ENST00000345009 KLF18A0A0U1RQI7 1052 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 TNPO2O14787 897 aaKnown RBP13.76□□□□□ -0.21
SNCA-202ENST00000345009 ATP2A1O14983 1001 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 STRNO43815 780 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 SMARCA1P28370 1054 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 SLC16A2P36021 539 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 NEK4P51957 841 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 PKN2Q16513 984 aaKnown RBP13.76□□□□□ -0.21
SNCA-202ENST00000345009 WDR78Q5VTH9 848 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 TTBK2Q6IQ55 1244 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 APOA5Q6Q788 366 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 CPXCR1Q8N123 301 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 SHCBP1Q8NEM2 672 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 CD99L2Q8TCZ2 262 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 AGXT2Q9BYV1 514 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 UBA5Q9GZZ9 404 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 ALDH8A1Q9H2A2 487 aaPredicted RBP13.76□□□□□ -0.21
SNCA-202ENST00000345009 SENP2Q9HC62 589 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 TXNRD2Q9NNW7 524 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 BTBD7Q9P203 1132 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 MAD2L2Q9UI95 211 aa13.76□□□□□ -0.21
SNCA-202ENST00000345009 TMEM132BQ14DG7 1078 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 RTN1Q16799 776 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 Q3C1V9 767 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 TKFCQ3LXA3 575 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 SNRNP48Q6IEG0 339 aaKnown RBP13.75□□□□□ -0.21
SNCA-202ENST00000345009 CTU1Q7Z7A3 348 aaKnown RBP13.75□□□□□ -0.21
SNCA-202ENST00000345009 MICU3Q86XE3 530 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 NCAPG2Q86XI2 1143 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 RIOX2Q8IUF8 465 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 MOV10L1Q9BXT6 1211 aaKnown RBP13.75□□□□□ -0.21
SNCA-202ENST00000345009 VAT1LQ9HCJ6 419 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 FBXO40Q9UH90 709 aa13.75□□□□□ -0.21
SNCA-202ENST00000345009 GOLGA8BA8MQT2 603 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 CNMDO75829 334 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 ICAM1P05362 532 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 SLC4A3P48751 1232 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 METAP2P50579 478 aaKnown RBP eCLIP13.74□□□□□ -0.21
SNCA-202ENST00000345009 EVCP57679 992 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 APOBRQ0VD83 1088 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 RABEP1Q15276 862 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 CPLX2Q6PUV4 134 aaKnown RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 PLEKHH3Q7Z736 793 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 ADGRF4Q8IZF3 695 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 CHST13Q8NET6 341 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 ZNF274Q96GC6 653 aaPredicted RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 MYL10Q9BUA6 226 aa13.74□□□□□ -0.21
SNCA-202ENST00000345009 TMEM121BQ9BXQ6 578 aaPredicted RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 RANBP17Q9H2T7 1088 aaKnown RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 RAVER2Q9HCJ3 691 aaKnown RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 RYDENQ9NUL5 291 aaKnown RBP13.74□□□□□ -0.21
SNCA-202ENST00000345009 SLC5A4Q9NY91 659 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms