RNA–Protein interactions for RNA: ENST00000343017.11

SNX18-202, Transcript of sorting nexin 18, humanhuman

BASIC

Gene SNX18, Length 3,140 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX18-202ENST00000343017 RPN1P04843 607 aaKnown RBP17■□□□□ 0.31
SNX18-202ENST00000343017 PDHBP11177 359 aa17■□□□□ 0.31
SNX18-202ENST00000343017 RDXP35241 583 aaKnown RBP17■□□□□ 0.31
SNX18-202ENST00000343017 PHKA1P46020 1223 aa17■□□□□ 0.31
SNX18-202ENST00000343017 SPRED3Q2MJR0 410 aa17■□□□□ 0.31
SNX18-202ENST00000343017 PDXDC2PQ6P474 469 aa17■□□□□ 0.31
SNX18-202ENST00000343017 TNS3Q68CZ2 1445 aa17■□□□□ 0.31
SNX18-202ENST00000343017 DDX60Q8IY21 1712 aaKnown RBP17■□□□□ 0.31
SNX18-202ENST00000343017 MYH10P35580 1976 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 CLGNO14967 610 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 CYLC1P35663 651 aaPredicted RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 AKNAD1Q5T1N1 836 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 HELBQ8NG08 1087 aaPredicted RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 CCT8L2Q96SF2 557 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 RBM12Q9NTZ6 932 aaKnown RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 MEGF6O75095 1541 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 MCM7P33993 719 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 ZNF658Q5TYW1 1059 aaPredicted RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 CCDC13Q8IYE1 715 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 ZNF654Q8IZM8 581 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 PPANQ9NQ55 473 aaKnown RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 ATP2C2O75185 946 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 GLI1P08151 1106 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 HPDP32754 393 aaPredicted RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 EPHB4P54760 987 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 RNASE9P60153 205 aaKnown RBP16.99■□□□□ 0.31
SNX18-202ENST00000343017 PKN1Q16512 942 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 CCDC40Q4G0X9 1142 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 EHBP1Q8NDI1 1231 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 EPN3Q9H201 632 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 STIM2Q9P246 746 aa16.99■□□□□ 0.31
SNX18-202ENST00000343017 CHUKO15111 745 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 DDR1Q08345 913 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 CCDC181Q5TID7 509 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 TRIM47Q96LD4 638 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 OSBPL9Q96SU4 736 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 SIPA1L3O60292 1781 aaPredicted RBP16.98■□□□□ 0.31
SNX18-202ENST00000343017 STRCP1A6NGW2 1772 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 ARFGEF2Q9Y6D5 1785 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 PLEKHA8P1O95397 391 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 ERCC3P19447 782 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 ELF1P32519 619 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 KRT2P35908 639 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 TTC38Q5R3I4 469 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 TYW1BQ6NUM6 668 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 MAGEB6Q8N7X4 407 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 SLC40A1Q9NP59 571 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 ZNHIT6Q9NWK9 470 aaKnown RBP16.98■□□□□ 0.31
SNX18-202ENST00000343017 SLC4A4Q9Y6R1 1079 aa16.98■□□□□ 0.31
SNX18-202ENST00000343017 ANO9A1A5B4 782 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 E7EVH7 732 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 GTPBP6O43824 516 aaPredicted RBP16.97■□□□□ 0.31
SNX18-202ENST00000343017 EPB41P11171 864 aaKnown RBP16.97■□□□□ 0.31
SNX18-202ENST00000343017 TBC1D8BQ0IIM8 1120 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 E2F5Q15329 346 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 CFAP58Q5T655 872 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 IQCEQ6IPM2 695 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 LDHAL6AQ6ZMR3 332 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 MCM8Q9UJA3 840 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 SALL4Q9UJQ4 1053 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.97■□□□□ 0.31
SNX18-202ENST00000343017 RGPD5Q99666 1765 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 PATL2C9JE40 543 aaKnown RBP16.97■□□□□ 0.31
SNX18-202ENST00000343017 H7C1D1 291 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 VEGFAP15692 232 aaPredicted RBP16.97■□□□□ 0.31
SNX18-202ENST00000343017 MEA1Q16626 185 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 PTGISQ16647 500 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 ALS2CLQ60I27 953 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 NLRP14Q86W24 1093 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 MYCBPAPQ8TBZ2 947 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 FERMT2Q96AC1 680 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 UBAC1Q9BSL1 405 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 MYH13Q9UKX3 1938 aa16.97■□□□□ 0.31
SNX18-202ENST00000343017 TCRBV5S4A2TA0A5A2 114 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 PP2D1A8MPX8 630 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 SF3A3Q12874 501 aaKnown RBP eCLIP16.96■□□□□ 0.31
SNX18-202ENST00000343017 IFIT5Q13325 482 aaKnown RBP16.96■□□□□ 0.31
SNX18-202ENST00000343017 NEDD9Q14511 834 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 ZCRB1Q8TBF4 217 aaKnown RBP16.96■□□□□ 0.31
SNX18-202ENST00000343017 CCDC42Q96M95 316 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 PURBQ96QR8 312 aaKnown RBP16.96■□□□□ 0.31
SNX18-202ENST00000343017 EPB41L5Q9HCM4 733 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 ODF2LQ9ULJ1 636 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 ERICH2A1L162 156 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 NR1D1P20393 614 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 VAV2P52735 878 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 UBE3CQ15386 1083 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 C8orf74Q6P047 294 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 MIGA1Q8NAN2 632 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 GSG1L2A8MUP6 293 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 BUB1O43683 1085 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 PPP1R37O75864 691 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 GUCY2DQ02846 1103 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 CEP85LQ5SZL2 805 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 PIK3AP1Q6ZUJ8 805 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 IQCKQ8N0W5 287 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 ADSSL1Q8N142 457 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 PIK3R5Q8WYR1 880 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 TUBGCP2Q9BSJ2 902 aa16.96■□□□□ 0.31
SNX18-202ENST00000343017 VCPKMTQ9H867 229 aa16.96■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms