RNA–Protein interactions for RNA: ENST00000342690.4

RBM38-201, Transcript of RNA binding motif protein 38, humanhuman

TSL 3

Gene RBM38, Length 852 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM38-201ENST00000342690 NOL8Q76FK4 1167 aaKnown RBP25.53■■□□□ 1.68
RBM38-201ENST00000342690 CCAR1Q8IX12 1150 aaKnown RBP25.53■■□□□ 1.68
RBM38-201ENST00000342690 CCDC144CPQ8IYA2 1237 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 SHCBP1Q8NEM2 672 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 TEX13BQ9BXU2 312 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 PLXNB2O15031 1838 aa25.53■■□□□ 1.68
RBM38-201ENST00000342690 GNRH1P01148 92 aa25.52■■□□□ 1.68
RBM38-201ENST00000342690 METAP2P50579 478 aaKnown RBP eCLIP25.52■■□□□ 1.681e-6■■■□□ 15.4
RBM38-201ENST00000342690 COL13A1Q5TAT6 717 aaPredicted RBP25.52■■□□□ 1.68
RBM38-201ENST00000342690 WDR78Q5VTH9 848 aa25.52■■□□□ 1.68
RBM38-201ENST00000342690 GPR142Q7Z601 462 aa25.52■■□□□ 1.68
RBM38-201ENST00000342690 NCAPG2Q86XI2 1143 aa25.52■■□□□ 1.68
RBM38-201ENST00000342690 ADGRF4Q8IZF3 695 aa25.52■■□□□ 1.68
RBM38-201ENST00000342690 ZNF274Q96GC6 653 aaPredicted RBP25.52■■□□□ 1.68
RBM38-201ENST00000342690 LARP6Q9BRS8 491 aaKnown RBP25.52■■□□□ 1.68
RBM38-201ENST00000342690 RBM28Q9NW13 759 aaKnown RBP25.52■■□□□ 1.68
RBM38-201ENST00000342690 RIPK3Q9Y572 518 aa25.52■■□□□ 1.68
RBM38-201ENST00000342690 SLC25A27O95847 323 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 GNAQP50148 359 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 RTN1Q16799 776 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 PLEKHH3Q7Z736 793 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 NBPF11Q86T75 865 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 FANCBQ8NB91 859 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 COA7Q96BR5 231 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 AGBL1Q96MI9 1066 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 SRRDQ9UH36 339 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 GABRQQ9UN88 632 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 DOCK3Q8IZD9 2030 aa25.51■■□□□ 1.67
RBM38-201ENST00000342690 DHX16O60231 1041 aaKnown RBP25.5■■□□□ 1.67
RBM38-201ENST00000342690 TAL1P17542 331 aaPredicted RBP25.5■■□□□ 1.67
RBM38-201ENST00000342690 PDIA3P30101 505 aaKnown RBP25.5■■□□□ 1.67
RBM38-201ENST00000342690 SLC4A3P48751 1232 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 PRKCZQ05513 592 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 NID2Q14112 1375 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 PPP2R5BQ15173 497 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 MROH8Q9H579 483 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 JMJD4Q9H9V9 463 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 CWC22Q9HCG8 908 aaKnown RBP25.5■■□□□ 1.67
RBM38-201ENST00000342690 VAT1LQ9HCJ6 419 aa25.5■■□□□ 1.67
RBM38-201ENST00000342690 CCDC196A0A1B0GTZ2 297 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 CYTH3O43739 400 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 PLEKHA8P1O95397 391 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 ICAM1P05362 532 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 HOXD10P28358 340 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 COPB2P35606 906 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 CDC37Q16543 378 aaPredicted RBP25.49■■□□□ 1.67
RBM38-201ENST00000342690 LZTS2Q9BRK4 669 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 RIOX1Q9H6W3 641 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 TPCN1Q9ULQ1 816 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 LIMCH1Q9UPQ0 1083 aa25.49■■□□□ 1.67
RBM38-201ENST00000342690 MCM2P49736 904 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 STK3Q13188 491 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 MTMR8Q96EF0 704 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 SLKQ9H2G2 1235 aaPredicted RBP25.48■■□□□ 1.67
RBM38-201ENST00000342690 GJD2Q9UKL4 321 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 CCPG1Q9ULG6 757 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 HPS5Q9UPZ3 1129 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 PTPN22Q9Y2R2 807 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 ZNF236Q9UL36 1845 aa25.48■■□□□ 1.67
RBM38-201ENST00000342690 PTPREP23469 700 aa25.47■■□□□ 1.67
RBM38-201ENST00000342690 PRMT2P55345 433 aa25.47■■□□□ 1.67
RBM38-201ENST00000342690 QRICH1Q2TAL8 776 aa25.47■■□□□ 1.67
RBM38-201ENST00000342690 MORN1Q5T089 497 aa25.47■■□□□ 1.67
RBM38-201ENST00000342690 TMTC3Q6ZXV5 915 aa25.47■■□□□ 1.67
RBM38-201ENST00000342690 SRBD1Q8N5C6 995 aaKnown RBP25.47■■□□□ 1.67
RBM38-201ENST00000342690 IVNS1ABPQ9Y6Y0 642 aa25.47■■□□□ 1.67
RBM38-201ENST00000342690 ALAS1P13196 640 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 FLT3LGP49771 235 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 CCT2P78371 535 aaKnown RBP25.46■■□□□ 1.67
RBM38-201ENST00000342690 GRB14Q14449 540 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 PKN2Q16513 984 aaKnown RBP25.46■■□□□ 1.67
RBM38-201ENST00000342690 CMTR1Q8N1G2 835 aaKnown RBP25.46■■□□□ 1.67
RBM38-201ENST00000342690 SOCS4Q8WXH5 440 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 ZSCAN31Q96LW9 406 aaPredicted RBP25.46■■□□□ 1.67
RBM38-201ENST00000342690 SPZ1Q9BXG8 430 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 MCOLN1Q9GZU1 580 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 HOMER2Q9NSB8 354 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 RNF146Q9NTX7 359 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 FAM217BQ9NTX9 383 aaPredicted RBP25.46■■□□□ 1.67
RBM38-201ENST00000342690 PTCH2Q9Y6C5 1203 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 SMCHD1A6NHR9 2005 aa25.46■■□□□ 1.67
RBM38-201ENST00000342690 MYH6P13533 1939 aa25.45■■□□□ 1.67
RBM38-201ENST00000342690 SLC15A5A6NIM6 579 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 PFKFB2O60825 505 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 CDC27P30260 824 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 TKFCQ3LXA3 575 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 FBXO46Q6PJ61 603 aaPredicted RBP25.45■■□□□ 1.66
RBM38-201ENST00000342690 CHST13Q8NET6 341 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 USP6NLQ92738 828 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 PIGSQ96S52 555 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 NUDT12Q9BQG2 462 aa25.45■■□□□ 1.66
RBM38-201ENST00000342690 SMARCA1P28370 1054 aa25.44■■□□□ 1.66
RBM38-201ENST00000342690 HOMER1Q86YM7 354 aa25.44■■□□□ 1.66
RBM38-201ENST00000342690 TRERF1Q96PN7 1200 aa25.44■■□□□ 1.66
RBM38-201ENST00000342690 MMP19Q99542 508 aa25.44■■□□□ 1.66
RBM38-201ENST00000342690 SH2B1Q9NRF2 756 aaPredicted RBP25.44■■□□□ 1.66
RBM38-201ENST00000342690 CPLX1O14810 134 aa25.43■■□□□ 1.66
RBM38-201ENST00000342690 ZBTB5O15062 677 aa25.43■■□□□ 1.66
RBM38-201ENST00000342690 STRNO43815 780 aa25.43■■□□□ 1.66
RBM38-201ENST00000342690 MAP2K5Q13163 448 aa25.43■■□□□ 1.66
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms