RNA–Protein interactions for RNA: ENST00000340058.5

RET-201, Transcript of ret proto-oncogene, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RET, Length 4,149 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RET-201ENST00000340058 OR8K1Q8NGG5 319 aa16.35■□□□□ 0.21
RET-201ENST00000340058 PPP2R2CQ9Y2T4 447 aa16.35■□□□□ 0.21
RET-201ENST00000340058 PRPF3O43395 683 aaKnown RBP16.34■□□□□ 0.21
RET-201ENST00000340058 FLOT1O75955 427 aa16.34■□□□□ 0.21
RET-201ENST00000340058 TTLL1O95922 423 aa16.34■□□□□ 0.21
RET-201ENST00000340058 GPSM2P81274 684 aa16.34■□□□□ 0.21
RET-201ENST00000340058 USP49Q70CQ1 688 aa16.34■□□□□ 0.21
RET-201ENST00000340058 CEP95Q96GE4 821 aa16.34■□□□□ 0.21
RET-201ENST00000340058 WTIPA6NIX2 430 aaPredicted RBP16.34■□□□□ 0.21
RET-201ENST00000340058 ETF1P62495 437 aaKnown RBP16.34■□□□□ 0.21
RET-201ENST00000340058 VWDEQ8N2E2 1590 aa16.34■□□□□ 0.21
RET-201ENST00000340058 EPB41L4AQ9HCS5 686 aaPredicted RBP16.34■□□□□ 0.21
RET-201ENST00000340058 VPS18Q9P253 973 aa16.34■□□□□ 0.21
RET-201ENST00000340058 TMEM131LA2VDJ0 1609 aa16.34■□□□□ 0.21
RET-201ENST00000340058 PLCB3Q01970 1234 aa16.34■□□□□ 0.21
RET-201ENST00000340058 KLHL30Q0D2K2 578 aa16.34■□□□□ 0.21
RET-201ENST00000340058 FAM26FQ5R3K3 315 aa16.34■□□□□ 0.21
RET-201ENST00000340058 CCDC25Q86WR0 208 aa16.34■□□□□ 0.21
RET-201ENST00000340058 MYOCDQ8IZQ8 938 aa16.34■□□□□ 0.21
RET-201ENST00000340058 TMEM87AQ8NBN3 555 aa16.34■□□□□ 0.21
RET-201ENST00000340058 USP42Q9H9J4 1324 aaKnown RBP16.34■□□□□ 0.21
RET-201ENST00000340058 ZMYND15Q9H091 742 aa16.34■□□□□ 0.21
RET-201ENST00000340058 USP17L15C9J2P7 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L13C9JLJ4 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L11C9JVI0 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L18D6R9N7 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L22D6RA61 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L17D6RBQ6 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L19D6RCP7 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L20D6RJB6 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 POTEB2H3BUK9 544 aa16.33■□□□□ 0.21
RET-201ENST00000340058 ENC1O14682 589 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L24Q0WX57 530 aa16.33■□□□□ 0.21
RET-201ENST00000340058 USP17L6PQ6QN14 398 aa16.33■□□□□ 0.21
RET-201ENST00000340058 GH2P01242 217 aa16.33■□□□□ 0.2
RET-201ENST00000340058 FMR1NBQ8N0W7 255 aaPredicted RBP16.33■□□□□ 0.2
RET-201ENST00000340058 GJD4Q96KN9 370 aaPredicted RBP16.33■□□□□ 0.2
RET-201ENST00000340058 PRR29P0C7W0 189 aa16.33■□□□□ 0.2
RET-201ENST00000340058 PLCG1P19174 1290 aa16.33■□□□□ 0.2
RET-201ENST00000340058 ABCB4P21439 1286 aa16.33■□□□□ 0.2
RET-201ENST00000340058 MCM3P25205 808 aa16.33■□□□□ 0.2
RET-201ENST00000340058 TXNRD1Q16881 649 aa16.33■□□□□ 0.2
RET-201ENST00000340058 PLA2G4DQ86XP0 818 aa16.33■□□□□ 0.2
RET-201ENST00000340058 CCDC127Q96BQ5 260 aa16.33■□□□□ 0.2
RET-201ENST00000340058 BRIP1Q9BX63 1249 aa16.33■□□□□ 0.2
RET-201ENST00000340058 SRPRBQ9Y5M8 271 aaKnown RBP16.33■□□□□ 0.2
RET-201ENST00000340058 CTDNEP1O95476 244 aa16.32■□□□□ 0.2
RET-201ENST00000340058 RXRBP28702 533 aa16.32■□□□□ 0.2
RET-201ENST00000340058 COPB1P53618 953 aaKnown RBP16.32■□□□□ 0.2
RET-201ENST00000340058 SF3A3Q12874 501 aaKnown RBP eCLIP16.32■□□□□ 0.2
RET-201ENST00000340058 COL9A3Q14050 684 aaPredicted RBP16.32■□□□□ 0.2
RET-201ENST00000340058 LLGL1Q15334 1064 aa16.32■□□□□ 0.2
RET-201ENST00000340058 CCDC144BQ3MJ40 725 aa16.32■□□□□ 0.2
RET-201ENST00000340058 RNF187Q5TA31 235 aaPredicted RBP16.32■□□□□ 0.2
RET-201ENST00000340058 CHURC1Q8WUH1 139 aa16.32■□□□□ 0.2
RET-201ENST00000340058 TMEM260Q9NX78 707 aa16.32■□□□□ 0.2
RET-201ENST00000340058 FDPSP14324 419 aaKnown RBP16.32■□□□□ 0.2
RET-201ENST00000340058 CHRNA5P30532 468 aa16.32■□□□□ 0.2
RET-201ENST00000340058 SMCR8Q8TEV9 937 aaPredicted RBP16.32■□□□□ 0.2
RET-201ENST00000340058 PAGE5Q96GU1 130 aa16.32■□□□□ 0.2
RET-201ENST00000340058 AMNQ9BXJ7 453 aa16.32■□□□□ 0.2
RET-201ENST00000340058 IFIH1Q9BYX4 1025 aaKnown RBP16.32■□□□□ 0.2
RET-201ENST00000340058 PANK4Q9NVE7 773 aa16.32■□□□□ 0.2
RET-201ENST00000340058 BUB1O43683 1085 aa16.32■□□□□ 0.2
RET-201ENST00000340058 CCDC172P0C7W6 258 aa16.32■□□□□ 0.2
RET-201ENST00000340058 PTPREP23469 700 aa16.32■□□□□ 0.2
RET-201ENST00000340058 LONP1P36776 959 aaKnown RBP16.32■□□□□ 0.2
RET-201ENST00000340058 KLHL7Q8IXQ5 586 aa16.32■□□□□ 0.2
RET-201ENST00000340058 LSM14BQ9BX40 385 aaKnown RBP16.32■□□□□ 0.2
RET-201ENST00000340058 TMOD4Q9NZQ9 345 aa16.32■□□□□ 0.2
RET-201ENST00000340058 DIP2BQ9P265 1576 aa16.32■□□□□ 0.2
RET-201ENST00000340058 PCP11498 1178 aaKnown RBP16.31■□□□□ 0.2
RET-201ENST00000340058 CUL4BQ13620 913 aa16.31■□□□□ 0.2
RET-201ENST00000340058 SHC4Q6S5L8 630 aa16.31■□□□□ 0.2
RET-201ENST00000340058 TTC16Q8NEE8 873 aa16.31■□□□□ 0.2
RET-201ENST00000340058 NSUN4Q96CB9 384 aaKnown RBP16.31■□□□□ 0.2
RET-201ENST00000340058 GSDMAQ96QA5 445 aa16.31■□□□□ 0.2
RET-201ENST00000340058 TUBGCP2Q9BSJ2 902 aa16.31■□□□□ 0.2
RET-201ENST00000340058 POTEMA6NI47 508 aa16.31■□□□□ 0.2
RET-201ENST00000340058 ZEB2O60315 1214 aa16.31■□□□□ 0.2
RET-201ENST00000340058 RBL2Q08999 1139 aa16.31■□□□□ 0.2
RET-201ENST00000340058 NAA30Q147X3 362 aaPredicted RBP16.31■□□□□ 0.2
RET-201ENST00000340058 IFI16Q16666 785 aaKnown RBP16.31■□□□□ 0.2
RET-201ENST00000340058 SLC9C1Q4G0N8 1177 aa16.31■□□□□ 0.2
RET-201ENST00000340058 SUPT20HQ8NEM7 779 aa16.31■□□□□ 0.2
RET-201ENST00000340058 FNBP1Q96RU3 617 aa16.31■□□□□ 0.2
RET-201ENST00000340058 IMPG2Q9BZV3 1241 aa16.31■□□□□ 0.2
RET-201ENST00000340058 NF2P35240 595 aa16.31■□□□□ 0.2
RET-201ENST00000340058 POLR2FP61218 127 aaKnown RBP16.31■□□□□ 0.2
RET-201ENST00000340058 SEPT2Q15019 361 aa16.31■□□□□ 0.2
RET-201ENST00000340058 ASIC2Q16515 512 aa16.31■□□□□ 0.2
RET-201ENST00000340058 TSGA10IPQ3SY00 556 aa16.31■□□□□ 0.2
RET-201ENST00000340058 CCDC50Q8IVM0 306 aa16.31■□□□□ 0.2
RET-201ENST00000340058 CCDC94Q9BW85 323 aaPredicted RBP16.31■□□□□ 0.2
RET-201ENST00000340058 SPATA31A1Q5TZJ5 1347 aa16.31■□□□□ 0.2
RET-201ENST00000340058 TRIM49BA6NDI0 452 aa16.3■□□□□ 0.2
RET-201ENST00000340058 NTSR2O95665 410 aa16.3■□□□□ 0.2
RET-201ENST00000340058 TNFAIP3P21580 790 aa16.3■□□□□ 0.2
RET-201ENST00000340058 CC2D2BQ6DHV5 1058 aa16.3■□□□□ 0.2
RET-201ENST00000340058 ARHGAP27Q6ZUM4 889 aa16.3■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms