RNA–Protein interactions for RNA: ENST00000339861.8

SEMA4D-201, Transcript of semaphorin 4D, humanhuman

TSL 5 BASIC

Gene SEMA4D, Length 4,258 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4D-201ENST00000339861 ZNF658Q5TYW1 1059 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 SMCR8Q8TEV9 937 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 MINPP1Q9UNW1 487 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 TNS3Q68CZ2 1445 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 SMIM23A6NLE4 172 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 FOXP2O15409 715 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 DDAH1O94760 285 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 FAM76AQ8TAV0 307 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 TRIM31Q9BZY9 425 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 ZNF446Q9NWS9 450 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 ARPP21Q9UBL0 812 aaPredicted RBP12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 ABCC12Q96J65 1359 aa12.35□□□□□ -0.43
SEMA4D-201ENST00000339861 ERVV-1B6SEH8 477 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 OR52Z1P0C646 297 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 PLA2G4AP47712 749 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 ATP1A2P50993 1020 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CASP8Q14790 479 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 ALX1Q15699 326 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 KCTD16Q68DU8 428 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CNNM4Q6P4Q7 775 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 KRT26Q7Z3Y9 468 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CCDC51Q96ER9 411 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 L2HGDHQ9H9P8 463 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 DCP1AQ9NPI6 582 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CCNL1Q9UK58 526 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 ZNF804BA4D1E1 1349 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 WDR19Q8NEZ3 1342 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CDHR2Q9BYE9 1310 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 STK36Q9NRP7 1315 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 GOLGA6CA6NDK9 693 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 GOLGA6BA6NDN3 693 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 GOLGA6DP0CG33 693 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 DNM2P50570 870 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 VSNL1P62760 191 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 EVX2Q03828 476 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 NR1I3Q14994 352 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 WHAMMP3Q1A5X7 153 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 C8orf74Q6P047 294 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 ZNF622Q969S3 477 aaKnown RBP eCLIP12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 RASSF4Q9H2L5 321 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 GOLGA6AQ9NYA3 693 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CTDP1Q9Y5B0 961 aaPredicted RBP12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 IFFO1Q0D2I5 559 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 NYXQ9GZU5 481 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 HAUS4Q9H6D7 363 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 SLIT1O75093 1534 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 A0A087X0B3 334 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 SLC16A2P36021 539 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 RASSF7Q02833 373 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 MFSD14BQ5SR56 506 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 CNBD1Q8NA66 436 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 TBCKQ8TEA7 893 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 PIGSQ96S52 555 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 PKD2L1Q9P0L9 805 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 PCDHA4Q9UN74 947 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 FHOD1Q9Y613 1164 aa12.34□□□□□ -0.43
SEMA4D-201ENST00000339861 N4BP1O75113 896 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 IVLP07476 585 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 LONP1P36776 959 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 MAP3K9P80192 1104 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 TRIM65Q6PJ69 517 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 FAM84BQ96KN1 310 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 DISC1Q9NRI5 854 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 ADD3Q9UEY8 706 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 RWDD2AQ9UIY3 292 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 A0A1B0GTH6 734 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 CHMP2AO43633 222 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 MOCS3O95396 460 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 GYPCP04921 128 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 VEGFAP15692 232 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 ZNF579Q8NAF0 562 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 RIN2Q8WYP3 895 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 PLA2G12BQ9BX93 195 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 INTS13Q9NVM9 706 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 FCER1AP12319 257 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 BTDP43251 543 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 SCNN1DP51172 638 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 USH1GQ495M9 461 aa12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 NOA1Q8NC60 698 aaKnown RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 SH3RF3Q8TEJ3 882 aaPredicted RBP12.33□□□□□ -0.44
SEMA4D-201ENST00000339861 ZNF185O15231 689 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 KLK7P49862 253 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 VAV2P52735 878 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 GTF2IP78347 998 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 NEK8Q86SG6 692 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 TMEM110-MUSTN1A8MSY1 372 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 AKAP12Q02952 1782 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 MAEAQ7L5Y9 396 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 KRT25Q7Z3Z0 450 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 MB21D1Q8N884 522 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 NHEJ1Q9H9Q4 299 aaPredicted RBP12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 RNF40O75150 1001 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 CFAP58Q5T655 872 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 WDR66Q8TBY9 1149 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 ATP8A2Q9NTI2 1148 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 AGPAT5Q9NUQ2 364 aa12.32□□□□□ -0.44
SEMA4D-201ENST00000339861 ATP1A1P05023 1023 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 H2AFXP16104 143 aaPredicted RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 POLR2FP61218 127 aaKnown RBP12.31□□□□□ -0.44
SEMA4D-201ENST00000339861 P2RX5Q93086 422 aa12.31□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 17.9 ms