RNA–Protein interactions for RNA: ENST00000338700.9

TRIM2-201, Transcript of tripartite motif containing 2, humanhuman

TSL 1 (best) BASIC

Gene TRIM2, Length 6,735 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM2-201ENST00000338700 C8orf74Q6P047 294 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 SMC1BQ8NDV3 1235 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 ARHGEF1Q92888 912 aaKnown RBP8.53□□□□□ -1.04
TRIM2-201ENST00000338700 FAM193BQ96PV7 902 aaPredicted RBP8.53□□□□□ -1.04
TRIM2-201ENST00000338700 ME3Q16798 604 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 FAM173BQ6P4H8 233 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 CBX8Q9HC52 389 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 NFE2L3Q9Y4A8 694 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 ZBTB24O43167 697 aaPredicted RBP8.53□□□□□ -1.04
TRIM2-201ENST00000338700 KCNQ2O43526 872 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 PHKA1P46020 1223 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 SLC15A2Q16348 729 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 ASPRV1Q53RT3 343 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 HDXQ7Z353 690 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 CPLX4Q7Z7G2 160 aa8.53□□□□□ -1.04
TRIM2-201ENST00000338700 ZBTB12Q9Y330 459 aaPredicted RBP8.53□□□□□ -1.04
TRIM2-201ENST00000338700 ADCY9O60503 1353 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 DIP2AQ14689 1571 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 K7ENM7 598 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 MAGEA1P43355 309 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 GRAPQ13588 217 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 KCTD2Q14681 263 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 SETDB1Q15047 1291 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 MYSM1Q5VVJ2 828 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 CCDC121Q6ZUS5 278 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 ILDR1Q86SU0 546 aaPredicted RBP8.52□□□□□ -1.04
TRIM2-201ENST00000338700 GRAPLQ8TC17 118 aaPredicted RBP8.52□□□□□ -1.04
TRIM2-201ENST00000338700 SEC62Q99442 399 aaKnown RBP8.52□□□□□ -1.04
TRIM2-201ENST00000338700 CCDC94Q9BW85 323 aaPredicted RBP8.52□□□□□ -1.04
TRIM2-201ENST00000338700 ATG3Q9NT62 314 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 PANK4Q9NVE7 773 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 SAMD15Q9P1V8 674 aa8.52□□□□□ -1.04
TRIM2-201ENST00000338700 GMNNO75496 209 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 UTP14CQ5TAP6 766 aaKnown RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 TBC1D31Q96DN5 1066 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 NBPF3Q9H094 633 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 CROCC2H7BZ55 1655 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 FGAP02671 866 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 CYP2J2P51589 502 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 POLA2Q14181 598 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 ARHGAP44Q17R89 818 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 GEN1Q17RS7 908 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 GPATCH4Q5T3I0 446 aaKnown RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 ADALQ6DHV7 355 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 CSRNP1Q96S65 589 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 GOLGA8HP0CJ92 632 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 XRCC5P13010 732 aaKnown RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 ZNF75DP51815 510 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 PTH1RQ03431 593 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 DMP1Q13316 513 aaPredicted RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 TTC31Q49AM3 519 aaPredicted RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 TAOK1Q7L7X3 1001 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 CMTR1Q8N1G2 835 aaKnown RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 LSM14BQ9BX40 385 aaKnown RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 MTFR1LQ9H019 292 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 SOS2Q07890 1332 aaPredicted RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 DCCP43146 1447 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 POLGP54098 1239 aaPredicted RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 NBPF11Q86T75 865 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 AFAP1L2Q8N4X5 818 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 NOL12Q9UGY1 213 aaKnown RBP eCLIP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 V9GYY5 206 aaPredicted RBP8.52□□□□□ -1.05
TRIM2-201ENST00000338700 LAMC1P11047 1609 aa8.52□□□□□ -1.05
TRIM2-201ENST00000338700 CLRN2A0PK11 232 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 HOXD10P28358 340 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 PNOCQ13519 176 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 TFDP1Q14186 410 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 DPP9Q86TI2 863 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 IFT20Q8IY31 132 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 RDH13Q8NBN7 331 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 RNF169Q8NCN4 708 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 PLEKHF1Q96S99 279 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 SUDS3Q9H7L9 328 aaPredicted RBP8.51□□□□□ -1.05
TRIM2-201ENST00000338700 ZSWIM6Q9HCJ5 1215 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 KIDINS220Q9ULH0 1771 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 COL15A1P39059 1388 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 TTLL1O95922 423 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 CROCCP2Q86T23 111 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 AMNQ9BXJ7 453 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 MYO1AQ9UBC5 1043 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP8.51□□□□□ -1.05
TRIM2-201ENST00000338700 SORBS3O60504 671 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 KIF11P52732 1056 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 GPKOWQ92917 476 aaPredicted RBP eCLIP8.51□□□□□ -1.05
TRIM2-201ENST00000338700 PPANQ9NQ55 473 aaKnown RBP8.51□□□□□ -1.05
TRIM2-201ENST00000338700 COL4A3BPQ9Y5P4 624 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 ADORA1P30542 326 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 CLCN1P35523 988 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 ERCC6LQ2NKX8 1250 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 SRGAP1Q7Z6B7 1085 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 SLC17A8Q8NDX2 589 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 FAM76AQ8TAV0 307 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 STAMQ92783 540 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 VPS18Q9P253 973 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 ASIC3Q9UHC3 531 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 MYO3BQ8WXR4 1341 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 PUS3Q9BZE2 481 aaKnown RBP8.51□□□□□ -1.05
TRIM2-201ENST00000338700 MIS12Q9H081 205 aa8.51□□□□□ -1.05
TRIM2-201ENST00000338700 RTEL1Q9NZ71 1219 aa8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.5 ms