RNA–Protein interactions for RNA: ENST00000337392.9

CLPTM1-201, Transcript of CLPTM1, transmembrane protein, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLPTM1, Length 2,604 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPTM1-201ENST00000337392 TMX4Q9H1E5 349 aaPredicted RBP26.16■■□□□ 1.78
CLPTM1-201ENST00000337392 GDF11O95390 407 aa26.16■■□□□ 1.78
CLPTM1-201ENST00000337392 DISC1Q9NRI5 854 aa26.16■■□□□ 1.78
CLPTM1-201ENST00000337392 NRXN2Q9P2S2 1712 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 CCDC96Q2M329 555 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 TMC4Q7Z404 712 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 TMX1Q9H3N1 280 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 NOL12Q9UGY1 213 aaKnown RBP eCLIP26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 V9GYY5 206 aaPredicted RBP26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 TDP2O95551 362 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 PTPN14Q15678 1187 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 ADGRF4Q8IZF3 695 aa26.15■■□□□ 1.78
CLPTM1-201ENST00000337392 PCNTO95613 3336 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 MYH8P13535 1937 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 USP17L10C9JJH3 530 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 H0YIN7 160 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 EDIL3O43854 480 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 NEMFO60524 1076 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 SOGA3Q5TF21 947 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 APTXQ7Z2E3 356 aaKnown RBP26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 TRIML1Q8N9V2 468 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 HPS3Q969F9 1004 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 PPP1R13BQ96KQ4 1090 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 FAM198AQ9UFP1 575 aa26.14■■□□□ 1.78
CLPTM1-201ENST00000337392 FOCADQ5VW36 1801 aa26.14■■□□□ 1.77
CLPTM1-201ENST00000337392 NYAP1Q6ZVC0 841 aa26.14■■□□□ 1.77
CLPTM1-201ENST00000337392 CERS3Q8IU89 383 aa26.14■■□□□ 1.77
CLPTM1-201ENST00000337392 TDRD3Q9H7E2 651 aaKnown RBP26.14■■□□□ 1.77
CLPTM1-201ENST00000337392 JMJD4Q9H9V9 463 aa26.14■■□□□ 1.77
CLPTM1-201ENST00000337392 DYNC1I1O14576 645 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 C21orf2O43822 256 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 SLC37A4O43826 429 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 TTLL1O95922 423 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 UBA7P41226 1012 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 TXKP42681 527 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 NONOQ15233 471 aaKnown RBP eCLIP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 DAGLBQ8NCG7 672 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 CCDC150Q8NCX0 1101 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 GSDMAQ96QA5 445 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 NUP88Q99567 741 aaPredicted RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 IGKV6D-41A0A0C4DH26 115 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 LONP1P36776 959 aaKnown RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 PMS1P54277 932 aaKnown RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 DACT2Q5SW24 774 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 ARL6IP4Q66PJ3 421 aaKnown RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 FAM177A1Q8N128 213 aaPredicted RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 REXO1Q8N1G1 1221 aaKnown RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 RIOX1Q9H6W3 641 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 C6orf50Q9HD87 102 aa26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 SCAF8Q9UPN6 1271 aaKnown RBP26.13■■□□□ 1.77
CLPTM1-201ENST00000337392 CBFA2T2O43439 604 aa26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 JAG1P78504 1218 aa26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 PDE4CQ08493 712 aa26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 DACH1Q9UI36 760 aa26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 RPN1P04843 607 aaKnown RBP26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 PLCG1P19174 1290 aa26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 NOVP48745 357 aa26.12■■□□□ 1.77
CLPTM1-201ENST00000337392 RXRBP28702 533 aa26.11■■□□□ 1.77
CLPTM1-201ENST00000337392 PRCPP42785 496 aa26.11■■□□□ 1.77
CLPTM1-201ENST00000337392 TNNI2P48788 182 aa26.11■■□□□ 1.77
CLPTM1-201ENST00000337392 MTF1Q14872 753 aa26.11■■□□□ 1.77
CLPTM1-201ENST00000337392 NEK8Q86SG6 692 aa26.11■■□□□ 1.77
CLPTM1-201ENST00000337392 LZTS2Q9BRK4 669 aa26.11■■□□□ 1.77
CLPTM1-201ENST00000337392 ZNF543Q08ER8 600 aa26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 ZNF772Q68DY9 489 aaPredicted RBP26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 HHIPL2Q6UWX4 724 aa26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 MORC2Q9Y6X9 1032 aaPredicted RBP26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 SPATA1Q5VX52 437 aa26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 PODNQ7Z5L7 613 aa26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 TMEM139Q8IV31 216 aa26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 DESI2Q9BSY9 194 aa26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 FRMD4AQ9P2Q2 1039 aaPredicted RBP26.1■■□□□ 1.77
CLPTM1-201ENST00000337392 POTEMA6NI47 508 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 GTPBP6O43824 516 aaPredicted RBP26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 OR52Z1P0C646 297 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 ERCC5P28715 1186 aaPredicted RBP26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 SEPT2Q15019 361 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 TC2NQ8N9U0 490 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 VPS16Q9H269 839 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 A0A0U1RQJ8 604 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 YDJCA8MPS7 323 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 HLA-DOAP06340 250 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 EEF2P13639 858 aaKnown RBP26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 TXLNAP40222 546 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 NR1I3Q14994 352 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 SYT10Q6XYQ8 523 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 ATRIPQ8WXE1 791 aa26.09■■□□□ 1.77
CLPTM1-201ENST00000337392 FANCGO15287 622 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 GNA11P29992 359 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 SPECC1LQ69YQ0 1117 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 NELFBQ8WX92 580 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 NUDT12Q9BQG2 462 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L15C9J2P7 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L13C9JLJ4 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L11C9JVI0 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L18D6R9N7 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L22D6RA61 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L17D6RBQ6 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L19D6RCP7 530 aa26.08■■□□□ 1.77
CLPTM1-201ENST00000337392 USP17L20D6RJB6 530 aa26.08■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms