RNA–Protein interactions for RNA: ENST00000335793.3

CDC42EP4-201, Transcript of CDC42 effector protein 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42EP4, Length 3,272 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42EP4-201ENST00000335793 PNMA1Q8ND90 353 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 OR8K1Q8NGG5 319 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 MYO6Q9UM54 1294 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 STAG2Q8N3U4 1231 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 CPVLQ9H3G5 476 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 DONSONQ9NYP3 566 aa18.5■□□□□ 0.55
CDC42EP4-201ENST00000335793 PARP4Q9UKK3 1724 aaKnown RBP18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 TTC26A0AVF1 554 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 TSPY3P0CV98 308 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 TSPY8P0CW00 308 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 PDE6BP35913 854 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 HDAC6Q9UBN7 1215 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 LETM2Q2VYF4 491 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 CSGALNACT2Q8N6G5 542 aa18.49■□□□□ 0.55
CDC42EP4-201ENST00000335793 SEMA3EO15041 775 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 SCP2P22307 547 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 TBC1D8BQ0IIM8 1120 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 PFKFB3Q16875 520 aaPredicted RBP18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 MTRQ99707 1265 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 JADE2Q9NQC1 790 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 TCP11L1Q9NUJ3 509 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 ANKIB1Q9P2G1 1089 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 USP17L3A6NCW0 530 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 USP17L4A6NCW7 530 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 H7C1D1 291 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 SRGAP2O75044 1071 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 NDUFA10O95299 355 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 RPS8P62241 208 aaKnown RBP18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 IL17AQ16552 155 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 USP17L1Q7RTZ2 530 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 NSUN4Q96CB9 384 aaKnown RBP18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 NLRP3Q96P20 1036 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 MACROD2A1Z1Q3 448 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 B4DLN1 442 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 IRF6O14896 467 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 VSNL1P62760 191 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 ASIC1P78348 528 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 SATB1Q01826 763 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 RPAINQ86UA6 219 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 PRPF38AQ8NAV1 312 aaKnown RBP18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 SLC24A3Q9HC58 644 aa18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 LIMA1Q9UHB6 759 aaKnown RBP18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 SAP30BPQ9UHR5 308 aaKnown RBP18.48■□□□□ 0.55
CDC42EP4-201ENST00000335793 ZMYND10O75800 440 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 NBPF5PQ86XG9 351 aaPredicted RBP18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 NOA1Q8NC60 698 aaKnown RBP18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 GBP3Q9H0R5 595 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 ANKZF1Q9H8Y5 726 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 BSDC1Q9NW68 430 aaPredicted RBP18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 H3BQF6 201 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 KCNQ2O43526 872 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 LONP1P36776 959 aaKnown RBP18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 TRAPPC10P48553 1259 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 BIRC2Q13490 618 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 TRIM14Q14142 442 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 PDXDC2PQ6P474 469 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 DISC1Q9NRI5 854 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 PBX1P40424 430 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 PDE4DQ08499 809 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 MCTP2Q6DN12 878 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 PPM1EQ8WY54 764 aa18.47■□□□□ 0.55
CDC42EP4-201ENST00000335793 N4BP1O75113 896 aaKnown RBP18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 LIG3P49916 1009 aa18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 NPY5RQ15761 445 aa18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 ACBD3Q9H3P7 528 aa18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 NAPAP54920 295 aa18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 TMEM60Q9H2L4 133 aa18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 EXOC1Q9NV70 894 aa18.46■□□□□ 0.55
CDC42EP4-201ENST00000335793 FAM205AQ6ZU69 1335 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 MATR3P43243 847 aaKnown RBP eCLIP18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 WHAMMP3Q1A5X7 153 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 LRCH2Q5VUJ6 765 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 MB21D1Q8N884 522 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 SLC44A5Q8NCS7 719 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 ATP8A2Q9NTI2 1148 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 PCDHA4Q9UN74 947 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 FAN1Q9Y2M0 1017 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 CCNT1O60563 726 aaKnown RBP18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 PMS1P54277 932 aaKnown RBP18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 NAP1L1P55209 391 aaKnown RBP18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 CYP27A1Q02318 531 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 ZNF384Q8TF68 577 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 SGSM3Q96HU1 749 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 ARPP21Q9UBL0 812 aaPredicted RBP18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 SOGA3Q5TF21 947 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 TNFRSF25Q93038 417 aa18.45■□□□□ 0.54
CDC42EP4-201ENST00000335793 MYH2Q9UKX2 1941 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 KRT86O43790 486 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 MARCH6O60337 910 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 PCP11498 1178 aaKnown RBP18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 IDEP14735 1019 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 HSPA1LP34931 641 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 BEND6Q5SZJ8 279 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 TGFBRAP1Q8WUH2 860 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 TUBGCP2Q9BSJ2 902 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 SAR1BQ9Y6B6 198 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 NID2Q14112 1375 aa18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 CYLC1P35663 651 aaPredicted RBP18.44■□□□□ 0.54
CDC42EP4-201ENST00000335793 TUBB2AQ13885 445 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 68.2 ms