RNA–Protein interactions for RNA: ENST00000334895.9

TPM1-204, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,637 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-204ENST00000334895 BRI3BPQ8WY22 251 aa24.84■■□□□ 1.57
TPM1-204ENST00000334895 MTMR6Q9Y217 621 aa24.84■■□□□ 1.57
TPM1-204ENST00000334895 CCL15-CCL14A0A0B4J2E2 113 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 STXBP3O00186 592 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 CETPP11597 493 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 DSG3P32926 999 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 CCL15Q16663 113 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 HEATR3Q7Z4Q2 680 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 ATG4CQ96DT6 458 aa24.83■■□□□ 1.57
TPM1-204ENST00000334895 COL11A1P12107 1806 aaPredicted RBP24.83■■□□□ 1.56
TPM1-204ENST00000334895 AOC2O75106 756 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 COG2Q14746 738 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 KRT40Q6A162 431 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 CCDC102AQ96A19 550 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 BARHL2Q9NY43 387 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 CHMP5Q9NZZ3 219 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 ADAMTS5Q9UNA0 930 aa24.83■■□□□ 1.56
TPM1-204ENST00000334895 A0A0G2JMZ2 1700 aa24.82■■□□□ 1.56
TPM1-204ENST00000334895 SMCHD1A6NHR9 2005 aa24.82■■□□□ 1.56
TPM1-204ENST00000334895 BRD1O95696 1058 aa24.82■■□□□ 1.56
TPM1-204ENST00000334895 TAL1P17542 331 aaPredicted RBP24.82■■□□□ 1.56
TPM1-204ENST00000334895 ZIC5Q96T25 663 aa24.82■■□□□ 1.56
TPM1-204ENST00000334895 SLC38A10Q9HBR0 1119 aa24.82■■□□□ 1.56
TPM1-204ENST00000334895 KCNJ14Q9UNX9 436 aa24.82■■□□□ 1.56
TPM1-204ENST00000334895 VPS37CA5D8V6 355 aaPredicted RBP24.81■■□□□ 1.56
TPM1-204ENST00000334895 SPDYE16A6NNV3 312 aaPredicted RBP24.81■■□□□ 1.56
TPM1-204ENST00000334895 ZNF536O15090 1300 aa24.81■■□□□ 1.56
TPM1-204ENST00000334895 POTEEQ6S8J3 1075 aa24.81■■□□□ 1.56
TPM1-204ENST00000334895 MYPNQ86TC9 1320 aa24.81■■□□□ 1.56
TPM1-204ENST00000334895 REPS2Q8NFH8 660 aa24.81■■□□□ 1.56
TPM1-204ENST00000334895 COA7Q96BR5 231 aa24.81■■□□□ 1.56
TPM1-204ENST00000334895 ASCC2Q9H1I8 757 aaPredicted RBP24.81■■□□□ 1.56
TPM1-204ENST00000334895 BTBD19C9JJ37 291 aa24.8■■□□□ 1.56
TPM1-204ENST00000334895 VWA5AO00534 786 aa24.8■■□□□ 1.56
TPM1-204ENST00000334895 CCDC174Q6PII3 467 aa24.8■■□□□ 1.56
TPM1-204ENST00000334895 PTPN18Q99952 460 aa24.8■■□□□ 1.56
TPM1-204ENST00000334895 SH3GLB2Q9NR46 395 aa24.8■■□□□ 1.56
TPM1-204ENST00000334895 TESPA1A2RU30 521 aaPredicted RBP24.79■■□□□ 1.56
TPM1-204ENST00000334895 H3BQV1 296 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 NPY5RQ15761 445 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 IFFO2Q5TF58 517 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 RGS22Q8NE09 1264 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 P2RX7Q99572 595 aaKnown RBP24.79■■□□□ 1.56
TPM1-204ENST00000334895 PHF20Q9BVI0 1012 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 hCG_1984214I3L0E3 225 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 ADAMTS3O15072 1205 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 NUCB2P80303 420 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 NOGQ13253 232 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 FOXD4L5Q5VV16 416 aaPredicted RBP24.79■■□□□ 1.56
TPM1-204ENST00000334895 FBXO11Q86XK2 927 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 ZNF713Q8N859 430 aaPredicted RBP24.79■■□□□ 1.56
TPM1-204ENST00000334895 FOXD4L4Q8WXT5 416 aaPredicted RBP24.79■■□□□ 1.56
TPM1-204ENST00000334895 AMNQ9BXJ7 453 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 HOXC10Q9NYD6 342 aa24.79■■□□□ 1.56
TPM1-204ENST00000334895 MMP1P03956 469 aa24.78■■□□□ 1.56
TPM1-204ENST00000334895 ZSCAN22P10073 491 aaPredicted RBP24.78■■□□□ 1.56
TPM1-204ENST00000334895 IRX3P78415 501 aaPredicted RBP24.78■■□□□ 1.56
TPM1-204ENST00000334895 TRIM29Q14134 588 aa24.78■■□□□ 1.56
TPM1-204ENST00000334895 ANKRD23Q86SG2 305 aa24.78■■□□□ 1.56
TPM1-204ENST00000334895 FAM43AQ8N2R8 423 aa24.78■■□□□ 1.56
TPM1-204ENST00000334895 PCDHA1Q9Y5I3 950 aa24.78■■□□□ 1.56
TPM1-204ENST00000334895 NAPAP54920 295 aa24.77■■□□□ 1.56
TPM1-204ENST00000334895 SLC45A1Q9Y2W3 748 aa24.77■■□□□ 1.56
TPM1-204ENST00000334895 ZBED4O75132 1171 aa24.76■■□□□ 1.55
TPM1-204ENST00000334895 ICAM1P05362 532 aa24.76■■□□□ 1.55
TPM1-204ENST00000334895 FDX1P10109 184 aa24.76■■□□□ 1.55
TPM1-204ENST00000334895 PDIA4P13667 645 aaKnown RBP24.76■■□□□ 1.55
TPM1-204ENST00000334895 XBP1P17861 261 aa24.76■■□□□ 1.55
TPM1-204ENST00000334895 PABPC4Q13310 644 aaKnown RBP eCLIP24.76■■□□□ 1.55
TPM1-204ENST00000334895 USH1GQ495M9 461 aa24.76■■□□□ 1.55
TPM1-204ENST00000334895 AGBL1Q96MI9 1066 aa24.76■■□□□ 1.55
TPM1-204ENST00000334895 RAVER2Q9HCJ3 691 aaKnown RBP24.76■■□□□ 1.55
TPM1-204ENST00000334895 MANSC4A6NHS7 340 aaPredicted RBP24.75■■□□□ 1.55
TPM1-204ENST00000334895 KIF28PB7ZC32 967 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 PDHXO00330 501 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 HERVK_113P62684 666 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 TMEM132BQ14DG7 1078 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 PPP1R18Q6NYC8 613 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 LBX2Q6XYB7 198 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 FERMT3Q86UX7 667 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 OXER1Q8TDS5 423 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 ZMYND12Q9H0C1 365 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 ZNF214Q9UL59 606 aaPredicted RBP24.75■■□□□ 1.55
TPM1-204ENST00000334895 ESYT2A0FGR8 921 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 PEX10O60683 326 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 OSBPP22059 807 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 NLRP5P59047 1200 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 KIF23Q02241 960 aaPredicted RBP24.75■■□□□ 1.55
TPM1-204ENST00000334895 CPXCR1Q8N123 301 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 FAM177A1Q8N128 213 aaPredicted RBP24.75■■□□□ 1.55
TPM1-204ENST00000334895 CCDC148Q8NFR7 591 aa24.75■■□□□ 1.55
TPM1-204ENST00000334895 IGF2BP3O00425 579 aaKnown RBP eCLIP24.74■■□□□ 1.55
TPM1-204ENST00000334895 F13A1P00488 732 aa24.74■■□□□ 1.55
TPM1-204ENST00000334895 CYP2C8P10632 490 aa24.74■■□□□ 1.55
TPM1-204ENST00000334895 MAP2K2P36507 400 aa24.74■■□□□ 1.55
TPM1-204ENST00000334895 RESTQ13127 1097 aa24.74■■□□□ 1.55
TPM1-204ENST00000334895 DIS3L2Q8IYB7 885 aaKnown RBP24.74■■□□□ 1.55
TPM1-204ENST00000334895 CCDC12Q8WUD4 166 aaPredicted RBP24.74■■□□□ 1.55
TPM1-204ENST00000334895 SMCO2A6NFE2 343 aa24.73■■□□□ 1.55
TPM1-204ENST00000334895 BTBD18B2RXH4 712 aa24.73■■□□□ 1.55
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms