RNA–Protein interactions for RNA: ENST00000334258.9

SYNE3-201, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene SYNE3, Length 3,275 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-201ENST00000334258 RMND1Q9NWS8 449 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 CAPN7Q9Y6W3 813 aa15.34■□□□□ 0.05
SYNE3-201ENST00000334258 ABCC12Q96J65 1359 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 H7C1D1 291 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 GTPBP6O43824 516 aaPredicted RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 RPN1P04843 607 aaKnown RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 HNRNPH1P31943 449 aaKnown RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 ATP1A2P50993 1020 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 SPA17Q15506 151 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 EZH2Q15910 746 aaKnown RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 ZNF658Q5TYW1 1059 aaPredicted RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 GIGYF2Q6Y7W6 1299 aaKnown RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 HDAC7Q8WUI4 952 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 POLD4Q9HCU8 107 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 BCL9O00512 1426 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 SPATA31A5Q5VU36 1347 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 SPATA31A7Q8IWB4 1347 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 ZC3H4Q9UPT8 1303 aaKnown RBP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 GSG1L2A8MUP6 293 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 EIF3HO15372 352 aaKnown RBP eCLIP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 UQCRFS1P1P0C7P4 283 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 HSPA1LP34931 641 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 ALX1Q15699 326 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 KCTD16Q68DU8 428 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 GPIHBP1Q8IV16 184 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 OTUD6BQ8N6M0 293 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 AGPAT5Q9NUQ2 364 aa15.33■□□□□ 0.04
SYNE3-201ENST00000334258 NIP7Q9Y221 180 aaKnown RBP eCLIP15.33■□□□□ 0.04
SYNE3-201ENST00000334258 B4DLN1 442 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 PIK3AP1Q6ZUJ8 805 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 POTEDQ86YR6 584 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 LRRC1Q9BTT6 524 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 ISCA1Q9BUE6 129 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 RNF26Q9BY78 433 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 RCCD1A6NED2 376 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 SHOX2O60902 331 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 HSF2BPO75031 334 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 STAT6P42226 847 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 PDCLQ13371 301 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 SUSD4Q5VX71 490 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 WDR59Q6PJI9 974 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 AMOTL1Q8IY63 956 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 SMCR8Q8TEV9 937 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 PLIN2Q99541 437 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 RNF41Q9H4P4 317 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 NHEJ1Q9H9Q4 299 aaPredicted RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 DMGDHQ9UI17 866 aaKnown RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 LGALS16A8MUM7 142 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 CXCR5P32302 372 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 TBC1D8BQ0IIM8 1120 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 INTS5Q6P9B9 1019 aaKnown RBP15.32■□□□□ 0.04
SYNE3-201ENST00000334258 SLC51AQ86UW1 340 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 CCDC42Q96M95 316 aa15.32■□□□□ 0.04
SYNE3-201ENST00000334258 TNKSO95271 1327 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 GOLGA8KD6RF30 607 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 PDE8BO95263 885 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 PCCAP05165 728 aaPredicted RBP15.31■□□□□ 0.04
SYNE3-201ENST00000334258 MAP2K2P36507 400 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 SEMA3FQ13275 785 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 GBP6Q6ZN66 633 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 LCORLQ8N3X6 602 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 SPATA5Q8NB90 893 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 SRP68Q9UHB9 627 aaKnown RBP15.31■□□□□ 0.04
SYNE3-201ENST00000334258 CAPN11Q9UMQ6 739 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 MYH8P13535 1937 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 C4AP0C0L4 1744 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 C4BP0C0L5 1744 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 PKD1L3Q7Z443 1732 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 NHSL1Q5SYE7 1610 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 ABCA3Q99758 1704 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 TCRBV5S4A2TA0A5A2 114 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 NLRP5P59047 1200 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 AMIGO3Q86WK7 504 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 ZBTB38Q8NAP3 1195 aaPredicted RBP15.31■□□□□ 0.04
SYNE3-201ENST00000334258 CEP89Q96ST8 783 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 DNAJC7Q99615 494 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 DONSONQ9NYP3 566 aa15.31■□□□□ 0.04
SYNE3-201ENST00000334258 PLEKHA8P1O95397 391 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 CATIPQ7Z7H3 387 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 SGSM3Q96HU1 749 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 MTRQ99707 1265 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 LRP2BPQ9P2M1 347 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 USO1O60763 962 aaKnown RBP15.3■□□□□ 0.04
SYNE3-201ENST00000334258 TACC1O75410 805 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 NAP1L1P55209 391 aaKnown RBP15.3■□□□□ 0.04
SYNE3-201ENST00000334258 RNF187Q5TA31 235 aaPredicted RBP15.3■□□□□ 0.04
SYNE3-201ENST00000334258 KRT26Q7Z3Y9 468 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 ESR2Q92731 530 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 ARL8AQ96BM9 186 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 PHF20Q9BVI0 1012 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 SMARCAL1Q9NZC9 954 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 LRWD1Q9UFC0 647 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 TOGARAM1Q9Y4F4 1720 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 PSMA7O14818 248 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 DNA2P51530 1060 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 SH2D3CQ8N5H7 860 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 AENQ8WTP8 325 aaKnown RBP15.3■□□□□ 0.04
SYNE3-201ENST00000334258 STAG1Q8WVM7 1258 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 SHISA4Q96DD7 197 aa15.3■□□□□ 0.04
SYNE3-201ENST00000334258 CCDC87Q9NVE4 849 aa15.3■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 33.3 ms