RNA–Protein interactions for RNA: ENST00000333611.8

LIMK2-202, Transcript of LIM domain kinase 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMK2, Length 3,462 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMK2-202ENST00000333611 GOPCQ9HD26 462 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 JAG2Q9Y219 1238 aa13.19□□□□□ -0.3
LIMK2-202ENST00000333611 A0A087X0B3 334 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 GOLGA6L10A6NI86 522 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 UBXN1Q04323 297 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 PPARAQ07869 468 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 MORC3Q14149 939 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 NBPF9Q3BBW0 867 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 CPLX4Q7Z7G2 160 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 SPATA5Q8NB90 893 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 C3orf20Q8ND61 904 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 STK38LQ9Y2H1 464 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 LAMA4Q16363 1823 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 DEXIO95424 95 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 CYP7A1P22680 504 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 ADCY2Q08462 1091 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 RASGRF1Q13972 1273 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 EARS2Q5JPH6 523 aaKnown RBP13.18□□□□□ -0.3
LIMK2-202ENST00000333611 CCDC122Q5T0U0 273 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 CFAP58Q5T655 872 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 TBC1D1Q86TI0 1168 aaPredicted RBP13.18□□□□□ -0.3
LIMK2-202ENST00000333611 FANCBQ8NB91 859 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 STAG1Q8WVM7 1258 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 KLHL33A6NCF5 533 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 PDE8BO95263 885 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 CXCR5P32302 372 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 HLTFQ14527 1009 aaKnown RBP eCLIP13.18□□□□□ -0.3
LIMK2-202ENST00000333611 KRT23Q9C075 422 aa13.18□□□□□ -0.3
LIMK2-202ENST00000333611 IFNAR1P17181 557 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 WHAMMP3Q1A5X7 153 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 SPATA1Q5VX52 437 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 CCDC170Q8IYT3 715 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 ZBTB38Q8NAP3 1195 aaPredicted RBP13.17□□□□□ -0.3
LIMK2-202ENST00000333611 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.17□□□□□ -0.3
LIMK2-202ENST00000333611 SMARCAL1Q9NZC9 954 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 AFDNP55196 1824 aaKnown RBP13.17□□□□□ -0.3
LIMK2-202ENST00000333611 ARHGAP23Q9P227 1491 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 PLEKHA8P1O95397 391 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 MCM3P25205 808 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 CNGA1P29973 690 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 CTSWP56202 376 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 POLE2P56282 527 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 TBX2Q13207 712 aaPredicted RBP13.17□□□□□ -0.3
LIMK2-202ENST00000333611 NR1I3Q14994 352 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 NAA35Q5VZE5 725 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 PIK3AP1Q6ZUJ8 805 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 TAX1BP1Q86VP1 789 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 MSANTD4Q8NCY6 345 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 RAB21Q9UL25 225 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 LMO7Q8WWI1 1683 aa13.17□□□□□ -0.3
LIMK2-202ENST00000333611 ESYT3A0FGR9 886 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 WNT7AO00755 349 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 ECEL1O95672 775 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 PCCAP05165 728 aaPredicted RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 ZNF18P17022 549 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 EZH2Q15910 746 aaKnown RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 KANK3Q6NY19 840 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 CRACR2BQ8N4Y2 399 aaPredicted RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 PPP1R12CQ9BZL4 782 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.16□□□□□ -0.32e-6■■■■□ 24.3
LIMK2-202ENST00000333611 GGT7Q9UJ14 662 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 TACC3Q9Y6A5 838 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 TNKSO95271 1327 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 ACTN4O43707 911 aaKnown RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 C21orf2O43822 256 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 DIAPH2O60879 1101 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 MFAP3LO75121 409 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 STARD3NLO95772 234 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 NLRP5P59047 1200 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 MDM2Q00987 491 aaPredicted RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 UBE3CQ15386 1083 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 ZNF473Q8WTR7 871 aaKnown RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 SPAG5Q96R06 1193 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 CHP1Q99653 195 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 ISCA1Q9BUE6 129 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 hCG_2014768A0A024R1R8 64 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 SLC5A1P13866 664 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 IDEP14735 1019 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 PTGDRQ13258 359 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 CCDC43Q96MW1 224 aaKnown RBP13.16□□□□□ -0.3
LIMK2-202ENST00000333611 GDAQ9Y2T3 454 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 SAR1BQ9Y6B6 198 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 PCDH11XQ9BZA7 1347 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 PCDH11YQ9BZA8 1340 aa13.16□□□□□ -0.3
LIMK2-202ENST00000333611 C5P01031 1676 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 TRIM49BA6NDI0 452 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 PRPF6O94906 941 aaKnown RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 PDHA1P08559 390 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 KRT2P35908 639 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 ENOX2Q16206 610 aaKnown RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 FAM133BQ5BKY9 247 aaKnown RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 IFIT1BQ5T764 474 aaKnown RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 CNGA4Q8IV77 575 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 RNPC3Q96LT9 517 aaKnown RBP13.15□□□□□ -0.3
LIMK2-202ENST00000333611 NLRP3Q96P20 1036 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 CCT8L2Q96SF2 557 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 CNNM2Q9H8M5 875 aa13.15□□□□□ -0.3
LIMK2-202ENST00000333611 SRPRBQ9Y5M8 271 aaKnown RBP13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms