RNA–Protein interactions for RNA: ENST00000332728.8

LYSMD4-201, Transcript of LysM domain containing 4, humanhuman

TSL 4 BASIC

Gene LYSMD4, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LYSMD4-201ENST00000332728 SPATA1Q5VX52 437 aa20.52■□□□□ 0.88
LYSMD4-201ENST00000332728 CCDC34Q96HJ3 373 aa20.52■□□□□ 0.88
LYSMD4-201ENST00000332728 CRAMP1Q96RY5 1269 aa20.52■□□□□ 0.88
LYSMD4-201ENST00000332728 USP17L10C9JJH3 530 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 RGL2O15211 777 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 URI1O94763 535 aaPredicted RBP20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 CASP14P31944 242 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 DYMQ7RTS9 669 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 CCDC148Q8NFR7 591 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 ZSWIM4Q9H7M6 989 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 ZNF287Q9HBT7 754 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 PARP3Q9Y6F1 533 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 SLC37A4O43826 429 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 BMP15O95972 392 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 FCER1AP12319 257 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 NR1I3Q14994 352 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 TMEM139Q8IV31 216 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 PODXL2Q9NZ53 605 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 SERPINB13Q9UIV8 391 aa20.51■□□□□ 0.87
LYSMD4-201ENST00000332728 PLCG2P16885 1265 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 KRT31Q15323 416 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 KMT5BQ4FZB7 885 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 TBC1D22AQ8WUA7 517 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 GSDMAQ96QA5 445 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 UBR3Q6ZT12 1888 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 RAD51AP2Q09MP3 1159 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 NONOQ15233 471 aaKnown RBP eCLIP20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 APTXQ7Z2E3 356 aaKnown RBP20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 CABP7Q86V35 215 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 C2CD5Q86YS7 1000 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 PPP2R2CQ9Y2T4 447 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 PAXBP1Q9Y5B6 917 aa20.5■□□□□ 0.87
LYSMD4-201ENST00000332728 DDTLA6NHG4 134 aaPredicted RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 ABL1P00519 1130 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 TFRCP02786 760 aaKnown RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 FXR1P51114 621 aaKnown RBP eCLIP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 AOC3Q16853 763 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 REXO1Q8N1G1 1221 aaKnown RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 WDR24Q96S15 920 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 C6orf50Q9HD87 102 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 TFR2Q9UP52 801 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 ADAMTSL1Q8N6G6 1762 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 NAV1Q8NEY1 1877 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 PPP1R11O60927 126 aaPredicted RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 IGSF3O75054 1194 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 ERCC6LQ2NKX8 1250 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 APOBEC3HQ6NTF7 200 aaKnown RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 ANKS1AQ92625 1134 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 NUDT12Q9BQG2 462 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 COA1Q9GZY4 146 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 TMX4Q9H1E5 349 aaPredicted RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 POLD4Q9HCU8 107 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 FRMD4AQ9P2Q2 1039 aaPredicted RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 GAKO14976 1311 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 ROBO3Q96MS0 1386 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 DDX60LQ5H9U9 1706 aaKnown RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L15C9J2P7 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L13C9JLJ4 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L11C9JVI0 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L18D6R9N7 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L22D6RA61 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L17D6RBQ6 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L19D6RCP7 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L20D6RJB6 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 GTPBP6O43824 516 aaPredicted RBP20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 SHMT1P34896 483 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 TRAPPC10P48553 1259 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 GNG11P61952 73 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L24Q0WX57 530 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 PAK1Q13153 545 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 USP17L6PQ6QN14 398 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 PPFIBP1Q86W92 1011 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 ADGRF4Q8IZF3 695 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 SPICE1Q8N0Z3 855 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 TRIML1Q8N9V2 468 aa20.49■□□□□ 0.87
LYSMD4-201ENST00000332728 CRKP46108 304 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 ASIC1P78348 528 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 IKQ13123 557 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 C15orf52Q6ZUT6 534 aaKnown RBP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 REXO1L1PQ8IX06 675 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 SLF2Q8IX21 1173 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 ZFP91Q96JP5 570 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 TCP11L1Q9NUJ3 509 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 SSBP05455 408 aaKnown RBP eCLIP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 OR52Z1P0C646 297 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 ERCC5P28715 1186 aaPredicted RBP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 LONP1P36776 959 aaKnown RBP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 ZMYND12Q9H0C1 365 aa20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 MRPL44Q9H9J2 332 aaKnown RBP20.48■□□□□ 0.87
LYSMD4-201ENST00000332728 CTIFO43310 598 aaKnown RBP20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 NEK8Q86SG6 692 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 TEKT1Q969V4 418 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 TDRD3Q9H7E2 651 aaKnown RBP20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 SLC39A2Q9NP94 309 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 ADD3Q9UEY8 706 aaKnown RBP20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 ZNF831Q5JPB2 1677 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 MYH1P12882 1939 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 A0A1B0GTH6 734 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 NPR1P16066 1061 aa20.47■□□□□ 0.87
LYSMD4-201ENST00000332728 CACNB1Q02641 598 aaPredicted RBP20.47■□□□□ 0.87
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms