RNA–Protein interactions for RNA: ENST00000331758.7

SS18L1-201, Transcript of SS18L1, nBAF chromatin remodeling complex subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SS18L1, Length 4,493 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18L1-201ENST00000331758 CETN3O15182 167 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 BMP3P12645 472 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 ATP1A3P13637 1013 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 ARHGAP27Q6ZUM4 889 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 CLEC10AQ8IUN9 316 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 CENPHQ9H3R5 247 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 MAN1B1Q9UKM7 699 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 ATP6V0A2Q9Y487 856 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 DAGLAQ9Y4D2 1042 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 BAZ2BQ9UIF8 2168 aaKnown RBP10.63□□□□□ -0.71
SS18L1-201ENST00000331758 FAM205CA6NFA0 338 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 KRT86O43790 486 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 GAS7O60861 476 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 ZBED4O75132 1171 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 KRT83P78385 493 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 PAXIP1Q6ZW49 1069 aaPredicted RBP10.63□□□□□ -0.71
SS18L1-201ENST00000331758 NT5C3AQ9H0P0 336 aa10.63□□□□□ -0.71
SS18L1-201ENST00000331758 ARHGAP6O43182 974 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 WDHD1O75717 1129 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 RPL13P26373 211 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 PRPF4BQ13523 1007 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 RAPGEF1Q13905 1077 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 MORC3Q14149 939 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 SEPT2Q15019 361 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 SPATA1Q5VX52 437 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 GPBP1Q86WP2 473 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 FOXP4Q8IVH2 680 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 LRRC8AQ8IWT6 810 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 MYRIPQ8NFW9 859 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 CACTINQ8WUQ7 758 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 XRN1Q8IZH2 1706 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 SLIT3O75094 1523 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 RIOK3O14730 519 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 FLOT1O75955 427 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 AKR1B1P15121 316 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 TMED8Q6PL24 325 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 ZNF277Q9NRM2 450 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 KCNJ18B7U540 433 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 EIF3JO75822 258 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 RCAN1P53805 252 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 SETQ01105 290 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 KCNJ12Q14500 433 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 CCDC122Q5T0U0 273 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 RESP18Q5W5W9 173 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 EHBP1Q8NDI1 1231 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 NEDD1Q8NHV4 660 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 MYO6Q9UM54 1294 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 AK9Q5TCS8 1911 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 CTAGE9A4FU28 777 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 GOLGA8FQ08AF8 430 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 GOLGA8DPQ0D2H9 430 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 COL9A3Q14050 684 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 ADGRA1Q86SQ6 560 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 MYCT1Q8N699 235 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 FAM207AQ9NSI2 230 aaPredicted RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 PUF60Q9UHX1 559 aaKnown RBP10.62□□□□□ -0.71
SS18L1-201ENST00000331758 KIAA1024Q9UPX6 916 aa10.62□□□□□ -0.71
SS18L1-201ENST00000331758 GCOM1H8Y6P7 765 aaPredicted RBP10.61□□□□□ -0.71
SS18L1-201ENST00000331758 GCNT3O95395 438 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 TUBB4AP04350 444 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 POLR2MP0CAP2 368 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 SHC4Q6S5L8 630 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 DESI2Q9BSY9 194 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 SAMSN1Q9NSI8 373 aaKnown RBP10.61□□□□□ -0.71
SS18L1-201ENST00000331758 NALCNQ8IZF0 1738 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 CCDC169A6NNP5 214 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 RTKN2Q8IZC4 609 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 MRPL44Q9H9J2 332 aaKnown RBP10.61□□□□□ -0.71
SS18L1-201ENST00000331758 MRPL11Q9Y3B7 192 aaKnown RBP10.61□□□□□ -0.71
SS18L1-201ENST00000331758 LTN1O94822 1766 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 MACROD2A1Z1Q3 448 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 POTEJP0CG39 1038 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 ST3GAL1Q11201 340 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 VGLL2Q8N8G2 317 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 SLF1Q9BQI6 1058 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 CRACR2AQ9BSW2 395 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 GBP3Q9H0R5 595 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 CCPG1Q9ULG6 757 aa10.61□□□□□ -0.71
SS18L1-201ENST00000331758 UTP18Q9Y5J1 556 aaKnown RBP eCLIP10.61□□□□□ -0.71
SS18L1-201ENST00000331758 FLT1P17948 1338 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 TESPA1A2RU30 521 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 TACC1O75410 805 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 GRM1Q13255 1194 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CDC37Q16543 378 aaPredicted RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CIAPIN1Q6FI81 312 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 PLA2G4DQ86XP0 818 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CAPZA3Q96KX2 299 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 MPHOSPH6Q99547 160 aaKnown RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 RIOK1Q9BRS2 568 aaKnown RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 PNMA6FA0A0J9YX94 578 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CTAGE15A4D2H0 777 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 IKBKBO14920 756 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 FOXN1O15353 648 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CTAGE8P0CG41 777 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 GRM4Q14833 912 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 SBK1Q52WX2 424 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 DALRD3Q5D0E6 543 aaKnown RBP10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CTAGE6Q86UF2 777 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 CTAGE4Q8IX94 777 aa10.6□□□□□ -0.71
SS18L1-201ENST00000331758 TBC1D5Q92609 795 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.6 ms