RNA–Protein interactions for RNA: ENST00000331479.3

SMDT1-201, Transcript of single-pass membrane protein with aspartate rich tail 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMDT1, Length 1,567 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMDT1-201ENST00000331479 ANKRD1Q15327 319 aa30.18■■■□□ 2.42
SMDT1-201ENST00000331479 TMTC3Q6ZXV5 915 aa30.18■■■□□ 2.42
SMDT1-201ENST00000331479 ZNF274Q96GC6 653 aaPredicted RBP30.18■■■□□ 2.42
SMDT1-201ENST00000331479 AGBL1Q96MI9 1066 aa30.18■■■□□ 2.42
SMDT1-201ENST00000331479 RIPK3Q9Y572 518 aa30.18■■■□□ 2.42
SMDT1-201ENST00000331479 NID2Q14112 1375 aa30.18■■■□□ 2.42
SMDT1-201ENST00000331479 ADD1P35611 737 aaKnown RBP30.17■■■□□ 2.42
SMDT1-201ENST00000331479 PSMC4P43686 418 aa30.17■■■□□ 2.42
SMDT1-201ENST00000331479 SNRNP48Q6IEG0 339 aaKnown RBP30.17■■■□□ 2.42
SMDT1-201ENST00000331479 ERO1AQ96HE7 468 aa30.17■■■□□ 2.42
SMDT1-201ENST00000331479 TRIM47Q96LD4 638 aa30.17■■■□□ 2.42
SMDT1-201ENST00000331479 TEX13BQ9BXU2 312 aa30.17■■■□□ 2.42
SMDT1-201ENST00000331479 RBM28Q9NW13 759 aaKnown RBP30.17■■■□□ 2.42
SMDT1-201ENST00000331479 BAZ2BQ9UIF8 2168 aaKnown RBP30.17■■■□□ 2.42
SMDT1-201ENST00000331479 SLC4A3P48751 1232 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 GNAQP50148 359 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 OAZ1P54368 228 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 CCT2P78371 535 aaKnown RBP30.16■■■□□ 2.42
SMDT1-201ENST00000331479 CCNA1P78396 465 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 CDC37Q16543 378 aaPredicted RBP30.16■■■□□ 2.42
SMDT1-201ENST00000331479 RIOX2Q8IUF8 465 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 CCDC82Q8N4S0 544 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 MTMR8Q96EF0 704 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 MGAMO43451 1857 aa30.16■■■□□ 2.42
SMDT1-201ENST00000331479 ERCC3P19447 782 aa30.15■■■□□ 2.42
SMDT1-201ENST00000331479 STK3Q13188 491 aa30.15■■■□□ 2.42
SMDT1-201ENST00000331479 LZTS2Q9BRK4 669 aa30.15■■■□□ 2.42
SMDT1-201ENST00000331479 SPZ1Q9BXG8 430 aa30.15■■■□□ 2.42
SMDT1-201ENST00000331479 NCOA5Q9HCD5 579 aaKnown RBP30.15■■■□□ 2.42
SMDT1-201ENST00000331479 KIF22Q14807 665 aa30.15■■■□□ 2.42
SMDT1-201ENST00000331479 SMCHD1A6NHR9 2005 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 FMNL1O95466 1100 aaPredicted RBP30.14■■■□□ 2.42
SMDT1-201ENST00000331479 ICAM1P05362 532 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 SMARCA1P28370 1054 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 QRICH1Q2TAL8 776 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 NCAPG2Q86XI2 1143 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 HOMER1Q86YM7 354 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 PIBF1Q8WXW3 757 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 PIGSQ96S52 555 aa30.14■■■□□ 2.42
SMDT1-201ENST00000331479 LARGE1O95461 756 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 MAPK4P31152 587 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 FCGRTP55899 365 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 FUT2Q10981 343 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 PPP2R5BQ15173 497 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 CCAR1Q8IX12 1150 aaKnown RBP30.13■■■□□ 2.41
SMDT1-201ENST00000331479 SHCBP1Q8NEM2 672 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 CCPG1Q9ULG6 757 aa30.13■■■□□ 2.41
SMDT1-201ENST00000331479 SLC25A27O95847 323 aa30.12■■■□□ 2.41
SMDT1-201ENST00000331479 ME3Q16798 604 aa30.12■■■□□ 2.41
SMDT1-201ENST00000331479 WDR78Q5VTH9 848 aa30.12■■■□□ 2.41
SMDT1-201ENST00000331479 CCDC196A0A1B0GTZ2 297 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 TNPO2O14787 897 aaKnown RBP30.11■■■□□ 2.41
SMDT1-201ENST00000331479 PPP1R11O60927 126 aaPredicted RBP30.11■■■□□ 2.41
SMDT1-201ENST00000331479 GPR142Q7Z601 462 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 PRDM10Q9NQV6 1147 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 HOMER2Q9NSB8 354 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 CNTNAP5Q8WYK1 1306 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 ZBTB5O15062 677 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 MROH8Q9H579 483 aa30.11■■■□□ 2.41
SMDT1-201ENST00000331479 DOCK3Q8IZD9 2030 aa30.1■■■□□ 2.41
SMDT1-201ENST00000331479 hCG_1642624A0A1W2PR95 340 aa30.1■■■□□ 2.41
SMDT1-201ENST00000331479 CD2BP2O95400 341 aaKnown RBP30.1■■■□□ 2.41
SMDT1-201ENST00000331479 ALAS1P13196 640 aa30.1■■■□□ 2.41
SMDT1-201ENST00000331479 SCRN1Q12765 414 aa30.1■■■□□ 2.41
SMDT1-201ENST00000331479 NTRK3Q16288 839 aa30.1■■■□□ 2.41
SMDT1-201ENST00000331479 SLKQ9H2G2 1235 aaPredicted RBP30.1■■■□□ 2.41
SMDT1-201ENST00000331479 MYH6P13533 1939 aa30.1■■■□□ 2.41
SMDT1-201ENST00000331479 PFKFB2O60825 505 aa30.09■■■□□ 2.41
SMDT1-201ENST00000331479 USH1GQ495M9 461 aa30.09■■■□□ 2.41
SMDT1-201ENST00000331479 OTOP1Q7RTM1 612 aa30.09■■■□□ 2.41
SMDT1-201ENST00000331479 PLEKHH3Q7Z736 793 aa30.09■■■□□ 2.41
SMDT1-201ENST00000331479 LIMCH1Q9UPQ0 1083 aa30.09■■■□□ 2.41
SMDT1-201ENST00000331479 PNMA6FA0A0J9YX94 578 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 FBXO11Q86XK2 927 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 NECAB1Q8N987 351 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 RRP36Q96EU6 259 aaKnown RBP30.08■■■□□ 2.41
SMDT1-201ENST00000331479 TRERF1Q96PN7 1200 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 CWC22Q9HCG8 908 aaKnown RBP30.08■■■□□ 2.41
SMDT1-201ENST00000331479 RNF146Q9NTX7 359 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 TRIM17Q9Y577 477 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 HTTP42858 3142 aa30.08■■■□□ 2.41
SMDT1-201ENST00000331479 ST18O60284 1047 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 PPFIA3O75145 1194 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 COPB2P35606 906 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 MUM1L1Q5H9M0 696 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 COA7Q96BR5 231 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 GABRQQ9UN88 632 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 PTPREP23469 700 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 PHKBQ93100 1093 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 GJD2Q9UKL4 321 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 V9GY48 417 aaPredicted RBP30.07■■■□□ 2.4
SMDT1-201ENST00000331479 PLXNB2O15031 1838 aa30.07■■■□□ 2.4
SMDT1-201ENST00000331479 PRKCZQ05513 592 aa30.06■■■□□ 2.4
SMDT1-201ENST00000331479 ARHGEF6Q15052 776 aa30.06■■■□□ 2.4
SMDT1-201ENST00000331479 TKFCQ3LXA3 575 aa30.06■■■□□ 2.4
SMDT1-201ENST00000331479 CHST13Q8NET6 341 aa30.06■■■□□ 2.4
SMDT1-201ENST00000331479 AMNQ9BXJ7 453 aa30.06■■■□□ 2.4
SMDT1-201ENST00000331479 MORN1Q5T089 497 aa30.05■■■□□ 2.4
SMDT1-201ENST00000331479 CLEC4DQ8WXI8 215 aa30.05■■■□□ 2.4
SMDT1-201ENST00000331479 SRRDQ9UH36 339 aa30.05■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms